Gene detail

Detail information of GWHGAAEX000074/evm.TU.scaffold_0.135

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|189502744\|ref\|YP_001958461.1\|	2.00E-25	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
nr	gi\|743759297\|ref\|XP_010931353.1\|	1.09E-180	PREDICTED: putative receptor-like protein kinase At4g00960 [Elaeis guineensis]
Swissprot	tr\|Q8GYA4\|CRK10_ARATH	5.00E-147	Cysteine-rich receptor-like protein kinase 10 (Precursor)
trEMBL	tr\|A0A067DEF7\|A0A067DEF7_CITSI	3.00E-166	Uncharacterized protein {ECO:0000313\|EMBL:KDO37422.1}
TAIR	AT4G23180	6.00E-146	cysteine-rich RLK (RECEPTOR-like protein kinase) 10

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	8173815	8176312	-

Transcript Sequence
>GWHTAAEX000074 ATGGTATTGCCCTCTTCTCCCGTCATCTTCCTGCTGCGCCTTACCCTGATCCTTCTTCTCATCGGCAAAGGTCATTCCCAAACCATCCCGCGCCTCTCTTACTGCTACGGCTTCAACTACACATCTCCCAGCTCCTTTGAGACCAACCTCCGTCTCCTCCTCTCCAACTTGTCCATTACCACTGCCAGCTCCCCTTCCTTCTTCTCAACGTCTTCCGTCGGAACCCCTCCCTCCCGAGTCTTCGGCATCGCTCAGTGCCGCCCTGATTCCTCCCCCGCATACTGTCGCAGCTGTCTTGACCTTGCCGCCGCCATGGCTGTCTCGATTAAGTCCGATGGGTGCGGCCGAAACAGCTCCGCCTCTCTCCGATACAACTATTGCCTCCTCCGCTACTCTGATAATGCGTTATACGGCGTTCCGGAGACTTTGGTTACCGCCATATTTTTTGTCACGAAAAACACGTCGGATTACCCTGGGTTCAGCAGCAGTGTCGTGGGCCTGTTAAACCGGATCTTGCCGGAGGCAGCATCGTCGGAGCTTAGGTACGCTGTGGCAACCCCAAGCAACAACTCTGGGAATGTAAAGAATATCTATGGAATGGCATGGTGTACGATGGACTTGCAGATCAGCGATTGCTACGACTGTCTGAGCAGGATTGAGAGCAAGCTTGACACCGAATGGACCGAAGGCGAAGAATCGAAGGTGAGCTGTATGGTTAAGTTTTCGACACTGCGTTTCTATTCCATTCCACTGCCATCCCCGCCGCCGGCGGGTCCTGGTCTTAGCAAAGGCCAAAGAAAGAGCTCCGTCATATTTGTCGTTGTGGTAGCGGTTATTGGATCGTTTGCGTTGGCGATCTTATTTACAGTACTTATTATTGTTATGCGGAGGAGGAAGAGGGGGAAACGGGTGCCAGTGCCGCCATTGATCACCTCAAACCTCCAGCTATCGGCAAGCGGGCATAACAAATATTCTTTTATGAAGAGCATCGAGTCATTGTTTCTTGATCTGGATGTGATTCGAACTGCCACAATGGATTTTTCCAAAGAAAACAAGCTTGGAGAAGGTGGATTTGGAGCGGTTTACAAGGGAGTACTTGACGATGGCCAGGAAATTGCGGTGAAGAGGCTCTCAAGAACATCAAGCCAGGGATTAAAGCAGCTGAGAAATGAGGTGGGTTTCGTGGCCAAGCTACAGCATCGAAATCTTGTGAAACTGTTGGGCTATTGCCTGAAAGATGACGAGATGCTGCTTGTTTACGAGTACCTCCCAAACAACAGCCTTGACAAGTACTTATCCGATCCTGTTAGGCTCTTGCAATTGGATTGGAAAACGCGGTACAGAATCATCGAAGGCATAGCCAGAGGCCTTCTTTATCTCCATGAAGATTCACGCTTCAGAATCATCCATCGCGATCTGAAATCCAGCAATATCTTGTTAGATATCCAAATGAACCCGAAAATTTCAGACTTTGGCATCGCGAAGCTCTTTAACAGGGATGAAACTAGAGGAATCACCAGCCAAGTCGCCGGTACTTTTGGCTACATGTCGCCGGAGTACGCTTTACATGGAAGCTTCTCCCCTAAATCAGATGTGTACAGTTATGGAGTTCTGGTATTGGAAATAATTTCCGGCCGTTTCAATAGTAGTGTGATTATATCTGAGAAGATTTCTTCAGACCTTCTTAGCCATGTTTGGCATTGTTGGAATGAAGACAAGGCATTGAAAGTTGTTGATCGGAGCCTTGGAGATCGGTATCCTTCGCCAGAAGCGTTGAGATGCATTCAAATCGGGCTGCTCTGCATCCAGGAAGACCCCTCCCTGAGACCTAGCATGTCTTCGTTGCTGTCCATGCTTACTAACAGCTCGGTTGCGCTCTCGGATCCCATGATGCCTACATTTCTACGGAAGATTGACGTTTAATTGCTTCCTCGTAGAAAGAATATGTTGATTGTCCAG

Network for GWHGAAEX000074

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01657.16	Stress-antifung	39	133	2.10E-17
PF01657.16	Stress-antifung	157	243	1.10E-07
PF00069.24	Pkinase	347	617	2.00E-50

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_DLSV

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.550
SRP064423	SRR2545915	Juvenile tuber	1.320
SRP108465	SRR5643513	five period of Gastrodia elata	0.690
	SRR5643514	five period of Gastrodia elata	0.330
	SRR5643515	five period of Gastrodia elata	0.150
	SRR5643524	five period of Gastrodia elata	0.400
	SRR5643525	five period of Gastrodia elata	0.430
	SRR5643528	five period of Gastrodia elata	0.080
	SRR5643658	five period of Gastrodia elata	0.150
	SRR5643659	five period of Gastrodia elata	0.030
	SRR5643660	five period of Gastrodia elata	0.500
	SRR5643661	five period of Gastrodia elata	1.570
	SRR5643662	five period of Gastrodia elata	0.140
	SRR5643663	five period of Gastrodia elata	0.030
	SRR5643664	five period of Gastrodia elata	0.130
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	2.950
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.890
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	4.500
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.890
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.120
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.730
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	3.170
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	4.160
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.990
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	3.230
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	2.600
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	2.600
SRP279888	Gastro	Gastrodia elata tuber	0.34
	Juven	Juvenile tuber	0.76
	Mother_Gastro	Mother tuber of Gastrodia elata	8.74
	Mother_Juven	Mother tuber of Juvenile	17.63