Detail information of GWHGAAEX000081/evm.TU.scaffold_0.147


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743791916|ref|XP_010923557.1|5.57E-49PREDICTED: transcription factor bHLH113-like isoform X1 [Elaeis guineensis]
Swissprottr|Q9LT67|BH113_ARATH4.00E-41Transcription factor bHLH113
trEMBLtr|M0U3U0|M0U3U0_MUSAM2.00E-41Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P26830_001}
TAIRAT3G195001.00E-40basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001485986378636494+
Transcript Sequence

Network for GWHGAAEX000081

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0046983Molecular Functionprotein dimerization activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.380
SRR2545915Juvenile tuber4.530
SRP108465SRR5643513five period of Gastrodia elata5.340
SRR5643514five period of Gastrodia elata7.180
SRR5643515five period of Gastrodia elata4.270
SRR5643524five period of Gastrodia elata4.340
SRR5643525five period of Gastrodia elata6.520
SRR5643528five period of Gastrodia elata9.090
SRR5643658five period of Gastrodia elata3.750
SRR5643659five period of Gastrodia elata2.010
SRR5643660five period of Gastrodia elata2.570
SRR5643661five period of Gastrodia elata2.380
SRR5643662five period of Gastrodia elata0.760
SRR5643663five period of Gastrodia elata1.730
SRR5643664five period of Gastrodia elata1.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.140
SRR6049655Rhizomagastrodiae_C368-T10_good_16.570
SRR6049656Rhizomagastrodiae_C368-T07_good_16.610
SRR6049657Rhizomagastrodiae_C368-T07_good_15.680
SRR6049658Rhizomagastrodiae_C368-T04_good_17.350
SRR6049659Rhizomagastrodiae_C368-T04_good_18.060
SRR6049660Rhizomagastrodiae_C368-T01_good_18.250
SRR6049661Rhizomagastrodiae_C368-T04_good_16.160
SRR6049662Rhizomagastrodiae_C368-T01_good_111.290
SRR6049663Rhizomagastrodiae_C368-T01_good_18.760
SRR6049664Rhizomagastrodiae_C368-T10_good_17.830
SRR6049665Rhizomagastrodiae_C368-T10_good_17.830
SRP279888GastroGastrodia elata tuber 6.80
JuvenJuvenile tuber9.01
Mother_GastroMother tuber of Gastrodia elata 86.17
Mother_JuvenMother tuber of Juvenile 66.03