Detail information of GWHGAAEX000084/evm.TU.scaffold_0.152


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743760803|ref|XP_010938921.1|3.93E-61PREDICTED: lamin-like protein [Elaeis guineensis]
Swissprottr|Q39131|LAML_ARATH1.00E-26Lamin-like protein (Precursor)
trEMBLtr|M0TYV3|M0TYV3_MUSAM1.00E-55Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P09440_001}
TAIRAT5G153504.00E-26early nodulin-like protein 17

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001491283169163718-
Transcript Sequence

Network for GWHGAAEX000084

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02298.16Cu_bind_like1141967.80E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009055Molecular Functionelectron carrier activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.710
SRR2545915Juvenile tuber14.030
SRP108465SRR5643513five period of Gastrodia elata15.180
SRR5643514five period of Gastrodia elata20.660
SRR5643515five period of Gastrodia elata13.180
SRR5643524five period of Gastrodia elata12.870
SRR5643525five period of Gastrodia elata15.020
SRR5643528five period of Gastrodia elata13.630
SRR5643658five period of Gastrodia elata21.160
SRR5643659five period of Gastrodia elata14.860
SRR5643660five period of Gastrodia elata8.940
SRR5643661five period of Gastrodia elata12.380
SRR5643662five period of Gastrodia elata20.940
SRR5643663five period of Gastrodia elata12.590
SRR5643664five period of Gastrodia elata9.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_154.110
SRR6049655Rhizomagastrodiae_C368-T10_good_170.250
SRR6049656Rhizomagastrodiae_C368-T07_good_148.240
SRR6049657Rhizomagastrodiae_C368-T07_good_137.840
SRR6049658Rhizomagastrodiae_C368-T04_good_126.910
SRR6049659Rhizomagastrodiae_C368-T04_good_117.680
SRR6049660Rhizomagastrodiae_C368-T01_good_119.590
SRR6049661Rhizomagastrodiae_C368-T04_good_133.640
SRR6049662Rhizomagastrodiae_C368-T01_good_137.280
SRR6049663Rhizomagastrodiae_C368-T01_good_117.160
SRR6049664Rhizomagastrodiae_C368-T10_good_142.580
SRR6049665Rhizomagastrodiae_C368-T10_good_142.580
SRP279888GastroGastrodia elata tuber 10.04
JuvenJuvenile tuber4.00
Mother_GastroMother tuber of Gastrodia elata 2.03
Mother_JuvenMother tuber of Juvenile 1.80