Detail information of GWHGAAEX000087/evm.TU.scaffold_0.163


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG26603.00E-120Locus-specific chromosome binding proteins
nrgi|743791578|ref|XP_010923474.1|2.97E-174PREDICTED: E3 ubiquitin protein ligase DRIP2-like isoform X1 [Elaeis guineensis]
Swissprottr|Q94AY3|DRIP2_ARATH7.00E-121E3 ubiquitin protein ligase DRIP2
trEMBLtr|A0A068U597|A0A068U597_COFCA2.00E-153Coffea canephora
TAIRAT2G305803.00E-120DREB2A-interacting protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001499352659975808-
Transcript Sequence

Network for GWHGAAEX000087

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13923.5zf-C3HC4_235756.70E-08
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyRING

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.710
SRR2545915Juvenile tuber7.580
SRP108465SRR5643513five period of Gastrodia elata10.050
SRR5643514five period of Gastrodia elata7.880
SRR5643515five period of Gastrodia elata10.530
SRR5643524five period of Gastrodia elata8.980
SRR5643525five period of Gastrodia elata9.660
SRR5643528five period of Gastrodia elata12.680
SRR5643658five period of Gastrodia elata10.420
SRR5643659five period of Gastrodia elata14.650
SRR5643660five period of Gastrodia elata14.230
SRR5643661five period of Gastrodia elata15.580
SRR5643662five period of Gastrodia elata14.160
SRR5643663five period of Gastrodia elata13.510
SRR5643664five period of Gastrodia elata13.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.480
SRR6049655Rhizomagastrodiae_C368-T10_good_110.910
SRR6049656Rhizomagastrodiae_C368-T07_good_16.540
SRR6049657Rhizomagastrodiae_C368-T07_good_16.150
SRR6049658Rhizomagastrodiae_C368-T04_good_16.090
SRR6049659Rhizomagastrodiae_C368-T04_good_15.890
SRR6049660Rhizomagastrodiae_C368-T01_good_15.580
SRR6049661Rhizomagastrodiae_C368-T04_good_16.180
SRR6049662Rhizomagastrodiae_C368-T01_good_18.920
SRR6049663Rhizomagastrodiae_C368-T01_good_17.030
SRR6049664Rhizomagastrodiae_C368-T10_good_111.280
SRR6049665Rhizomagastrodiae_C368-T10_good_111.280
SRP279888GastroGastrodia elata tuber 13.84
JuvenJuvenile tuber15.49
Mother_GastroMother tuber of Gastrodia elata 18.89
Mother_JuvenMother tuber of Juvenile 23.10