Detail information of GWHGAAEX000089/evm.TU.scaffold_0.175
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|256822426|ref|YP_003146389.1| | 7.00E-32 | serine/threonine protein kinase [Kangiella koreensis DSM 16069] |
| KOG | KOG0583 | 1.00E-131 | Serine/threonine protein kinase |
| nr | gi|743760265|ref|XP_010936028.1| | 1.46E-145 | PREDICTED: CBL-interacting protein kinase 7-like [Elaeis guineensis] |
| Swissprot | tr|Q9XIW0|CIPK7_ARATH | 3.00E-132 | CBL-interacting serine/threonine-protein kinase 7 |
| trEMBL | tr|C4P7W9|C4P7W9_VITVI | 3.00E-138 | CBL-interacting protein kinase 20 {ECO:0000313|EMBL:ACQ83536.1} |
| TAIR | AT3G23000 | 1.00E-131 | CBL-interacting protein kinase 7 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 10556914 | 10564345 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000089
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 44 | 297 | 5.90E-63 |
| PF03822.13 | NAF | 326 | 374 | 2.40E-16 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_CAMKL-CHK1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K12761 | SNF1 | Autophagy - yeast | map04138 |
| Meiosis - yeast | map04113 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0007165 | Biological Process | signal transduction |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 7.390 |
| SRR2545915 | Juvenile tuber | 6.210 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 27.540 |
| SRR5643514 | five period of Gastrodia elata | 25.310 | |
| SRR5643515 | five period of Gastrodia elata | 16.090 | |
| SRR5643524 | five period of Gastrodia elata | 17.830 | |
| SRR5643525 | five period of Gastrodia elata | 8.780 | |
| SRR5643528 | five period of Gastrodia elata | 2.740 | |
| SRR5643658 | five period of Gastrodia elata | 3.280 | |
| SRR5643659 | five period of Gastrodia elata | 13.530 | |
| SRR5643660 | five period of Gastrodia elata | 16.840 | |
| SRR5643661 | five period of Gastrodia elata | 17.520 | |
| SRR5643662 | five period of Gastrodia elata | 12.210 | |
| SRR5643663 | five period of Gastrodia elata | 10.920 | |
| SRR5643664 | five period of Gastrodia elata | 6.600 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 51.490 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 105.260 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 48.110 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 35.500 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 82.570 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 62.900 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 38.220 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 49.240 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 51.040 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 48.890 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 85.840 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 85.840 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 14.84 |
| Juven | Juvenile tuber | 43.63 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 62.03 | |
| Mother_Juven | Mother tuber of Juvenile | 22.60 |