Detail information of GWHGAAEX000090/evm.TU.scaffold_0.180


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|22298690|ref|NP_681937.1|2.00E-114carbon dioxide concentrating mechanism protein CcmK [Thermosynechococcus elongatus BP-1]
nrgi|743759786|ref|XP_010933798.1|0PREDICTED: uncharacterized protein LOC105054088 isoform X1 [Elaeis guineensis]
trEMBLtr|B9RUK8|B9RUK8_RICCO0Oxidoreductase, putative {ECO:0000313|EMBL:EEF44995.1}
TAIRAT5G399401.00E-177FAD/NAD(P)-binding oxidoreductase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141118142011265035-
Transcript Sequence

Network for GWHGAAEX000090

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03486.13HI0933_like534643.00E-110
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.960
SRR2545915Juvenile tuber14.500
SRP108465SRR5643513five period of Gastrodia elata10.010
SRR5643514five period of Gastrodia elata8.790
SRR5643515five period of Gastrodia elata5.750
SRR5643524five period of Gastrodia elata6.040
SRR5643525five period of Gastrodia elata12.540
SRR5643528five period of Gastrodia elata14.170
SRR5643658five period of Gastrodia elata12.360
SRR5643659five period of Gastrodia elata10.200
SRR5643660five period of Gastrodia elata9.200
SRR5643661five period of Gastrodia elata11.020
SRR5643662five period of Gastrodia elata8.900
SRR5643663five period of Gastrodia elata10.650
SRR5643664five period of Gastrodia elata10.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.380
SRR6049655Rhizomagastrodiae_C368-T10_good_19.580
SRR6049656Rhizomagastrodiae_C368-T07_good_110.090
SRR6049657Rhizomagastrodiae_C368-T07_good_113.100
SRR6049658Rhizomagastrodiae_C368-T04_good_113.100
SRR6049659Rhizomagastrodiae_C368-T04_good_116.460
SRR6049660Rhizomagastrodiae_C368-T01_good_115.370
SRR6049661Rhizomagastrodiae_C368-T04_good_114.030
SRR6049662Rhizomagastrodiae_C368-T01_good_112.280
SRR6049663Rhizomagastrodiae_C368-T01_good_113.020
SRR6049664Rhizomagastrodiae_C368-T10_good_19.240
SRR6049665Rhizomagastrodiae_C368-T10_good_19.240
SRP279888GastroGastrodia elata tuber 15.53
JuvenJuvenile tuber13.29
Mother_GastroMother tuber of Gastrodia elata 7.60
Mother_JuvenMother tuber of Juvenile 7.12