Gene detail

Detail information of GWHGAAEX000092/evm.TU.scaffold_0.185

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672144606\|ref\|XP_008796204.1\|	5.64E-60	PREDICTED: uncharacterized protein LOC103711723 isoform X2 [Phoenix dactylifera]
trEMBL	tr\|M0SD04\|M0SD04_MUSAM	2.00E-53	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P08870_001}
TAIR	AT3G53440	3.00E-30	Homeodomain-like superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	11630655	11644643	-

Transcript Sequence
>GWHTAAEX000092 AAAAAATATATATATATAAAAATTGTCAGTATTTGTTTTTTCTCAAACTCATCGTATTTCGTCTCCTACAGCGAGCAGCGAGCGAGGACCGACGAGCAGACTGAGCATCGAGCAGAGACGATATCTTTGATTGAGCAGCGAGCAGATGAGTTGCGATCTTCCTCTTCCCTTTGTCTTAGTCTTAGGATTTGAGGATTTAACCTCTTTCTTCGCATTTCTGAGAGCTGGAGACGAAGTGTGAGAAGAGAATGGCGAGCAACCCGAAAAATCCTAAGAAGGCGAACCTCCTTGATCCGCAATCCATCAAGAACGTTCTTTCAAGTTACATTTTGATTGTGCTCCCATTGGATTTTTTTGTCTCTACTCCAGCTACCAAATATGCCCCAACAGTTCACAACTATGGAAGAAATCAGCCTGAAGAAGCAGGCTCGCCATCGTTGCCAGTCTATCCAAACCTTGCGTCGATCGCCGCGCCTTCTTTTAGCTGTAAGAATGGGGCAAGTTCTCCCTCAACAACCCCTCAACTGTAAGGAGTTTGCAGAAATGGATCTTCAAAACCTTTCAAAGAAGAATTCAGACATTAAAAGAGGGCACGTGACTTGTGTTCCCCAAGCCCCTCTCCGTCGTTCTCCACGATTTCTTCCATGCAAAATGATGGAACCAGAAACTTTTTCACAGAAATTAACCTCTAGCATGAAATCAATAGAAACTCAACTGGGTTCTTCCTCTATTTCTTCCAAATTGAAGGAAGCCGCTTTTTCGAGAAAGACAATGGCAACAATTTGTAGGAATCAACAGAATCAGTCAAGGTCAAAGTTTGGCGTCACTTTTGGAAAGACACTGAATGGCCCTAGGCAATCTTATGAAGCTGGAATGGAAGCCCTTGAAACCCCGAAAGGGTTTCATTGTGGGAACCCTAGACGACAGTCTTTGAGGCTATTGGGTTTAGCTCCTGTTTTTACAGAAAATATGAACAAAGGGATTGAAGATTCTAATGTGAATAAAATGATTGGAAACTCCAATTTTAGCAATAAAGTAGAAGATAAGAAACTAGCCGATTGCAAGGTTGTGATCATGAGTCGTAATATGGAAATGACTTCTACTGCTACTGGGGCTAGAAAAAAAGGGAAAGAACCTGCAATTATTGCTAAGTCAGGCTCTGAGATAAATTTAAAAGATGATGGTGAATCCATTAGTTGTCTGATGAAAAGACCATTTTCTAGGCATATGGCATCATCAAATGATGTAATGAAGAGAGGAGTCCATTCGCAGATGACAAATAAAAAGGAGGAGGCTGTTGAAATGCGTACTGTTTGTAGGGGAGACTTACTTGCAAAAAGTAGAATAGATAACGGCTTTGTGATTATGAAAATAGCCAATCTTCACAAGGAGAAGAAAGAAAAGGAAACTGACGTGGGATTAGAGACTATGATTGAAAAAAATAAGAATGATGAATGCCATGGCTCGATAGCATGGAGCAAAGAACAAGAAGAAGCACTGCAAAATGCCTATTTATTGACAAAACCGTCTCCTCAGTTTTGGAAGAAAGTCTCTAAAATGGTGCCTGGAAAATCTGCCCAGGAATGCTTTGATAAAATCCATAACATTGTGACGCCACTTTCTTCCCGGAATCGGGCAAGGAAAAGAAAGAAAAGCATATCCCCAATAGTTGACTTTGATTTATCTTCCGAAATTTTTAATGTTTCAGAAACTAAAACTGGAAAGATAAGGAGATGTAAAACTAAGAGGCTTGCTGCGCAGAAGACAGTGAGGCATCTGCTAAGGAAACACTGCCTTACCAACCAAATGAAAACAGCCGATCATTTCTCACTTTTTGAGTCTTCTGCATTCAACATTGCACCGAATGCTTCTGATATCCCAACACCGATGTGTACTTCAAGTTCTTACCATCTTCCTCAACAGCCTTGTGAAAGGCTGTCGGCCAATTCTAAAATGCTCTCGAGTTTCAAACTATTTACTTCTCCGAGCAGTCCCAGTCCCGAAGTTTTGAAACAGATAAAGAACAGAGCTTTGCATGATAGATACATTGACCTACTGCATCAAAGAGAAGCCAGGAGAGCGATGCTTTCCAAAAAATCAAATCTTCATGATGTTGGGTCGGACAAGCACTGCAGTAAGGCCGAGCATGGTGCTGCAGAAGCAGCAAGGATATCACTCCTCACTGATGCTAAATTTTTCATTGGCCACTTCCAGAATAATATGGCTGACCCTACGCATGACCTTGATGCAGATTATAGCGATGAGTATCATGATACTGATGATGATGCTGAAATTGATGACTTTGATAGATGAAATGATACTGGTACATGTGAGTTGCTGATCTTTTTTGCAAGAAATTGACTATTTTCTTGGGTTTTCTTTTTGAATATAATGATAATACTTGCAATTCTTGTGTTCGAGAACTGAAGTTTTACTAAAGCTCATTTGTCTACTCCAAGCATGTTGAAGAAGTTGCTCAACAGCTCGCATCATTGAATACTAACTCAGACAAAGTAGCGTAGCAAGTGCAAGACGGCCTTAACACTCTGCATCGTCACCGTTATGACCAGTTATATTAGGAATTTTTCCCACTCTTGCTCCCCAGTACCTCT

Network for GWHGAAEX000092

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	62.160
SRP064423	SRR2545915	Juvenile tuber	68.000
SRP108465	SRR5643513	five period of Gastrodia elata	27.250
	SRR5643514	five period of Gastrodia elata	29.790
	SRR5643515	five period of Gastrodia elata	27.020
	SRR5643524	five period of Gastrodia elata	29.920
	SRR5643525	five period of Gastrodia elata	25.460
	SRR5643528	five period of Gastrodia elata	27.020
	SRR5643658	five period of Gastrodia elata	33.120
	SRR5643659	five period of Gastrodia elata	32.660
	SRR5643660	five period of Gastrodia elata	39.060
	SRR5643661	five period of Gastrodia elata	30.940
	SRR5643662	five period of Gastrodia elata	37.770
	SRR5643663	five period of Gastrodia elata	44.760
	SRR5643664	five period of Gastrodia elata	43.530
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	39.310
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	33.720
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	35.110
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	45.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	45.230
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	54.660
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	41.530
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	41.460
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	30.340
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	36.780
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	28.000
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	28.000
SRP279888	Gastro	Gastrodia elata tuber	43.10
	Juven	Juvenile tuber	37.02
	Mother_Gastro	Mother tuber of Gastrodia elata	29.82
	Mother_Juven	Mother tuber of Juvenile	24.76