Detail information of GWHGAAEX000095/evm.TU.scaffold_0.193


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG04273.00E-99Ubiquitin conjugating enzyme
nrgi|728847565|gb|KHG27008.1|1.38E-108putative ubiquitin-conjugating enzyme E2 18 -like protein [Gossypium arboreum]
Swissprottr|Q9FMM0|UBC18_ARATH8.00E-100Probable ubiquitin-conjugating enzyme E2 18
trEMBLtr|A6MUS6|A6MUS6_GOSHI1.00E-108Ubiquitin conjugating enzyme {ECO:0000313|EMBL:ABR14728.1}
TAIRAT5G429903.00E-99ubiquitin-conjugating enzyme 18

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141211224412149665-
Transcript Sequence

Network for GWHGAAEX000095

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.25UQ_con191545.00E-38
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
K10688UBE2W, UBC16 Ubiquitin mediated proteolysis map04120

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms127.790
SRR2545915Juvenile tuber121.320
SRP108465SRR5643513five period of Gastrodia elata136.960
SRR5643514five period of Gastrodia elata144.800
SRR5643515five period of Gastrodia elata136.340
SRR5643524five period of Gastrodia elata153.470
SRR5643525five period of Gastrodia elata267.180
SRR5643528five period of Gastrodia elata241.860
SRR5643658five period of Gastrodia elata294.580
SRR5643659five period of Gastrodia elata102.560
SRR5643660five period of Gastrodia elata96.720
SRR5643661five period of Gastrodia elata95.430
SRR5643662five period of Gastrodia elata94.980
SRR5643663five period of Gastrodia elata108.340
SRR5643664five period of Gastrodia elata108.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1166.310
SRR6049655Rhizomagastrodiae_C368-T10_good_1401.530
SRR6049656Rhizomagastrodiae_C368-T07_good_1179.600
SRR6049657Rhizomagastrodiae_C368-T07_good_1154.170
SRR6049658Rhizomagastrodiae_C368-T04_good_1203.880
SRR6049659Rhizomagastrodiae_C368-T04_good_1201.910
SRR6049660Rhizomagastrodiae_C368-T01_good_1157.330
SRR6049661Rhizomagastrodiae_C368-T04_good_1175.230
SRR6049662Rhizomagastrodiae_C368-T01_good_1147.860
SRR6049663Rhizomagastrodiae_C368-T01_good_1191.890
SRR6049664Rhizomagastrodiae_C368-T10_good_1229.810
SRR6049665Rhizomagastrodiae_C368-T10_good_1229.810
SRP279888GastroGastrodia elata tuber 141.90
JuvenJuvenile tuber122.42
Mother_GastroMother tuber of Gastrodia elata 200.40
Mother_JuvenMother tuber of Juvenile 129.15