Detail information of GWHGAAEX000100/evm.TU.scaffold_0.208


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|339327280|ref|YP_004686973.1|3.00E-34prolyl 4-hydroxylase alpha subunit [Cupriavidus necator N-1]
KOGKOG15912.00E-107Prolyl 4-hydroxylase alpha subunit
nrgi|672137853|ref|XP_008792661.1|3.74E-145PREDICTED: probable prolyl 4-hydroxylase 9 isoform X2 [Phoenix dactylifera]
Swissprottr|Q8VZJ7|P4H9_ARATH5.00E-136Probable prolyl 4-hydroxylase 9 (Precursor)
trEMBLtr|C0HIZ4|C0HIZ4_MAIZE2.00E-141Uncharacterized protein {ECO:0000313|EMBL:ACN26997.1, ECO:0000313|EnsemblPlants:GRMZM2G348578_P01}
TAIRAT4G339102.00E-1072-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141346881813521420+
Transcript Sequence

Network for GWHGAAEX000100

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13640.52OG-FeII_Oxy_31732861.10E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00472P4HA Metabolic pathways map01100
Arginine and proline metabolismmap00330

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0031418Molecular FunctionL-ascorbic acid binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0016705Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506Molecular Functioniron ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.130
SRR2545915Juvenile tuber22.970
SRP108465SRR5643513five period of Gastrodia elata27.520
SRR5643514five period of Gastrodia elata30.670
SRR5643515five period of Gastrodia elata24.550
SRR5643524five period of Gastrodia elata25.660
SRR5643525five period of Gastrodia elata24.070
SRR5643528five period of Gastrodia elata24.750
SRR5643658five period of Gastrodia elata26.710
SRR5643659five period of Gastrodia elata31.590
SRR5643660five period of Gastrodia elata30.280
SRR5643661five period of Gastrodia elata29.040
SRR5643662five period of Gastrodia elata34.850
SRR5643663five period of Gastrodia elata33.090
SRR5643664five period of Gastrodia elata38.460
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.270
SRR6049655Rhizomagastrodiae_C368-T10_good_146.050
SRR6049656Rhizomagastrodiae_C368-T07_good_123.080
SRR6049657Rhizomagastrodiae_C368-T07_good_123.030
SRR6049658Rhizomagastrodiae_C368-T04_good_114.680
SRR6049659Rhizomagastrodiae_C368-T04_good_113.790
SRR6049660Rhizomagastrodiae_C368-T01_good_115.260
SRR6049661Rhizomagastrodiae_C368-T04_good_117.340
SRR6049662Rhizomagastrodiae_C368-T01_good_115.130
SRR6049663Rhizomagastrodiae_C368-T01_good_116.360
SRR6049664Rhizomagastrodiae_C368-T10_good_119.530
SRR6049665Rhizomagastrodiae_C368-T10_good_119.530
SRP279888GastroGastrodia elata tuber 27.81
JuvenJuvenile tuber27.37
Mother_GastroMother tuber of Gastrodia elata 16.37
Mother_JuvenMother tuber of Juvenile 19.64