Detail information of GWHGAAEX000105/evm.TU.scaffold_0.216


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17216.00E-44FOG: Zn-finger
nrgi|672137877|ref|XP_008792675.1|4.23E-55PREDICTED: zinc finger protein ZAT10-like [Phoenix dactylifera]
Swissprottr|Q96289|ZAT10_ARATH2.00E-44Zinc finger protein ZAT10
trEMBLtr|M0S7N2|M0S7N2_MUSAM1.00E-47Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P13410_001}
TAIRAT1G277306.00E-44salt tolerance zinc finger

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141383851713839601+
Transcript Sequence

Network for GWHGAAEX000105

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_61121364.30E-13
PF13912.5zf-C2H2_61641891.50E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.890
SRR2545915Juvenile tuber20.230
SRP108465SRR5643513five period of Gastrodia elata48.620
SRR5643514five period of Gastrodia elata13.920
SRR5643515five period of Gastrodia elata181.460
SRR5643524five period of Gastrodia elata17.910
SRR5643525five period of Gastrodia elata72.110
SRR5643528five period of Gastrodia elata299.060
SRR5643658five period of Gastrodia elata72.000
SRR5643659five period of Gastrodia elata229.650
SRR5643660five period of Gastrodia elata42.360
SRR5643661five period of Gastrodia elata83.070
SRR5643662five period of Gastrodia elata243.280
SRR5643663five period of Gastrodia elata93.790
SRR5643664five period of Gastrodia elata519.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_172.990
SRR6049655Rhizomagastrodiae_C368-T10_good_1177.300
SRR6049656Rhizomagastrodiae_C368-T07_good_155.970
SRR6049657Rhizomagastrodiae_C368-T07_good_152.480
SRR6049658Rhizomagastrodiae_C368-T04_good_1106.160
SRR6049659Rhizomagastrodiae_C368-T04_good_1146.440
SRR6049660Rhizomagastrodiae_C368-T01_good_192.970
SRR6049661Rhizomagastrodiae_C368-T04_good_187.790
SRR6049662Rhizomagastrodiae_C368-T01_good_127.080
SRR6049663Rhizomagastrodiae_C368-T01_good_188.800
SRR6049664Rhizomagastrodiae_C368-T10_good_198.350
SRR6049665Rhizomagastrodiae_C368-T10_good_198.350
SRP279888GastroGastrodia elata tuber 57.83
JuvenJuvenile tuber3.13
Mother_GastroMother tuber of Gastrodia elata 1,201.83
Mother_JuvenMother tuber of Juvenile 583.79