Detail information of GWHGAAEX000106/evm.TU.scaffold_0.219


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743875702|ref|XP_010907392.1|1.72E-131PREDICTED: BTB/POZ domain-containing protein NPY4-like isoform X1 [Elaeis guineensis]
Swissprottr|O80970|NPY2_ARATH6.00E-101BTB/POZ domain-containing protein NPY2
trEMBLtr|F6HSU0|F6HSU0_VITVI7.00E-127Putative uncharacterized protein {ECO:0000313|EMBL:CCB57750.1}
TAIRAT2G148202.00E-100Phototropic-responsive NPH3 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141405742014061121+
Transcript Sequence

Network for GWHGAAEX000106

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.30BTB281139.00E-05
PF03000.13NPH32112517.90E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms27.750
SRR2545915Juvenile tuber19.430
SRP108465SRR5643513five period of Gastrodia elata6.790
SRR5643514five period of Gastrodia elata4.910
SRR5643515five period of Gastrodia elata5.710
SRR5643524five period of Gastrodia elata5.040
SRR5643525five period of Gastrodia elata6.230
SRR5643528five period of Gastrodia elata5.030
SRR5643658five period of Gastrodia elata7.580
SRR5643659five period of Gastrodia elata14.420
SRR5643660five period of Gastrodia elata13.590
SRR5643661five period of Gastrodia elata12.610
SRR5643662five period of Gastrodia elata17.660
SRR5643663five period of Gastrodia elata17.940
SRR5643664five period of Gastrodia elata22.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.680
SRR6049655Rhizomagastrodiae_C368-T10_good_18.460
SRR6049656Rhizomagastrodiae_C368-T07_good_16.040
SRR6049657Rhizomagastrodiae_C368-T07_good_110.700
SRR6049658Rhizomagastrodiae_C368-T04_good_13.710
SRR6049659Rhizomagastrodiae_C368-T04_good_15.180
SRR6049660Rhizomagastrodiae_C368-T01_good_16.390
SRR6049661Rhizomagastrodiae_C368-T04_good_14.860
SRR6049662Rhizomagastrodiae_C368-T01_good_16.270
SRR6049663Rhizomagastrodiae_C368-T01_good_15.710
SRR6049664Rhizomagastrodiae_C368-T10_good_17.430
SRR6049665Rhizomagastrodiae_C368-T10_good_17.430
SRP279888GastroGastrodia elata tuber 13.22
JuvenJuvenile tuber10.05
Mother_GastroMother tuber of Gastrodia elata 7.81
Mother_JuvenMother tuber of Juvenile 9.56