Detail information of GWHGAAEX000109/evm.TU.scaffold_0.223
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|672137861|ref|XP_008792666.1| | 3.20E-144 | PREDICTED: peroxidase 51-like [Phoenix dactylifera] |
| Swissprot | tr|Q9SZE7|PER51_ARATH | 3.00E-134 | Peroxidase 51 (Precursor) |
| trEMBL | tr|Q84UA9|Q84UA9_ARTAN | 4.00E-140 | Peroxidase 1 {ECO:0000313|EMBL:AAO45182.1} |
| TAIR | AT4G37530 | 1.00E-133 | Peroxidase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 14100592 | 14102848 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000109
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00141.22 | peroxidase | 69 | 319 | 2.60E-64 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00430 | E1.11.1.7 | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Phenylpropanoid biosynthesis | map00940 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0042744 | Biological Process | hydrogen peroxide catabolic process |
| GO:0006979 | Biological Process | response to oxidative stress |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0004601 | Molecular Function | peroxidase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 0.000 |
| SRR2545915 | Juvenile tuber | 0.130 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 13.770 |
| SRR5643514 | five period of Gastrodia elata | 9.310 | |
| SRR5643515 | five period of Gastrodia elata | 6.050 | |
| SRR5643524 | five period of Gastrodia elata | 7.200 | |
| SRR5643525 | five period of Gastrodia elata | 0.550 | |
| SRR5643528 | five period of Gastrodia elata | 0.710 | |
| SRR5643658 | five period of Gastrodia elata | 0.540 | |
| SRR5643659 | five period of Gastrodia elata | 0.240 | |
| SRR5643660 | five period of Gastrodia elata | 0.150 | |
| SRR5643661 | five period of Gastrodia elata | 0.150 | |
| SRR5643662 | five period of Gastrodia elata | 0.300 | |
| SRR5643663 | five period of Gastrodia elata | 0.120 | |
| SRR5643664 | five period of Gastrodia elata | 0.330 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.300 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.700 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 7.740 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.820 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.840 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 9.530 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.210 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.720 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.600 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.410 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.740 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.740 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.19 |
| Juven | Juvenile tuber | 0.40 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.80 | |
| Mother_Juven | Mother tuber of Juvenile | 0.13 |