Gene detail

Detail information of GWHGAAEX000112/evm.TU.scaffold_0.227

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|17986316\|ref\|NP_538950.1\|	5.00E-18	3-oxoacyl-ACP reductase [Brucella melitensis bv. 1 str. 16M]
KOG	KOG0725	3.00E-87	Reductases with broad range of substrate specificities
nr	gi\|672176087\|ref\|XP_008808111.1\|	7.31E-110	PREDICTED: carbonyl reductase [NADPH] 2 [Phoenix dactylifera]
Swissprot	tr\|Q94KL8\|SILD_PODPE	2.00E-09	Secoisolariciresinol dehydrogenase (Fragment)
trEMBL	tr\|A0A067LD15\|A0A067LD15_JATCU	3.00E-105	Uncharacterized protein {ECO:0000313\|EMBL:KDP46262.1}
TAIR	AT3G01980	3.00E-87	NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	14416179	14449937	-

Transcript Sequence
>GWHTAAEX000112 CTTGCTTTATAAATTACTCAATATTAATTTGTATACTAAACGGTCACTTATTAACATTTCTTTTTTATTTAAAAAAGGTGCAGAGCTTCTGTTAGGTACTTAGCTAATTTCAGTACCTAACTCAGTACCAGATCGTCTGATTCGGTCTTTAAAGCAAATTACCATCAGAATTCGTTTCTTCCTTCCCCTTTCTTTTGCTGACCTTCTCTTTTGCCCTGCAAATCTCATAGTTTTCGTATAAAAACAGTTTGTTATCTCTTAGGCACGGCCATGGAGAAGCTGACGAAGAGGGTCTTACTAACCTCAAGCGGCGACGAAGTTTCTAAGGGTATTGCTTTTCATCTGGCCAAGTGCGGCTGCAGGTTAGTTCTTTTGGGCGATGAGAATGACCTCCGATTTATTGTGTAGGATATGATGAGGATTTTGAATGGAGTGAATGCGATTGACGTTGTTGGAGTGAATATGGAAGATGAGCGGGAAGTGGTTTTTGATGAGGCTGTGGATAAGGCTTGGAAGCTGCTTGGAGCGCTGGATGCTTTTGTTAATTGTTTTGTCTATGAAGGTATCATTCAAGATCCTCTTCTTGTGAGTGAAGATGAGTACAAGAAAATTATAAAAGTGAATCTCACCGCACCATGGTTTTTGCTACAAGCTGTTGCTAAAAGAATGAGGGATGCCAAATCTGGAGGATCAGTTGTTTTCATGACGACTTTTTTAGGTGCAGAAAGAGGTTTGTATCCAGGAGCTGCTGCTTTGGGCATGTGCATGGGAGGCGTTCAACAATTGGTTCGAACGGCTGCATTAAATATCGGGAAGCACGAAATACGGGTTAATGGCATCGCGCGGGGGCTTCACCCGGGCGACGCCTACCCGGTCTCTGTCGGGAGGGAGAGGGCGGAGAGGCTGACTGCGGAAGCCATGCCTATGCAGAGATGGCTCAACCCCCAAAGAGATCTGGCTTCCACTATGCTCTATTTGATTGGAGATGATTCACGCTACATGACTGGCACGACCATCTTTGTCGATGGGGCCCAGTCAATGGTCAGGCCTCGAATGCGGTCGTTTATATGAAGCACCATCTCTCGGCTCCTACGGCACTACGGTCTTTTGTTGTTGCTGTTGTTGTTGTTGTTGTTGTCAGAGTAGGATGAGTTTAGGGTTTCATTACCCTCTTTATATTGAGAATTATGATTTCTATTGCTATTGCAATAATTGCACTCACCCTCATTTGGCTTTGGAAAAAAAAAAAGATGGTGTAATAATAATGCATTGTAAGGTTTAGAAATCAAAAGGCTAAAACAGATGGGCTGTTCTGAATATTGAGAAAATATATGATTCCAATGAGTATTGCTTTTGCACCTTAACATAGTGTAGAGGAACGATTAGTTGCAGAAGTTAAATGTAATTTAGGGGTTGCAAAAGTAAAACACATGGGGTCTTTTATGAAGTTTTGATTTTTTGCATGCTAAAATTTGACTCTCCCCTAGATGGCATAATTATTTAAGGTAAAAAAAGAAGTTAATATGAATCCTATTAATCACATCCCTCT

Network for GWHGAAEX000112

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13561.5	adh_short_C2	14	206	1.40E-29

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	40.150
SRP064423	SRR2545915	Juvenile tuber	38.120
SRP108465	SRR5643513	five period of Gastrodia elata	43.120
	SRR5643514	five period of Gastrodia elata	41.280
	SRR5643515	five period of Gastrodia elata	49.550
	SRR5643524	five period of Gastrodia elata	50.420
	SRR5643525	five period of Gastrodia elata	55.970
	SRR5643528	five period of Gastrodia elata	94.010
	SRR5643658	five period of Gastrodia elata	63.570
	SRR5643659	five period of Gastrodia elata	42.740
	SRR5643660	five period of Gastrodia elata	38.490
	SRR5643661	five period of Gastrodia elata	49.070
	SRR5643662	five period of Gastrodia elata	41.990
	SRR5643663	five period of Gastrodia elata	48.640
	SRR5643664	five period of Gastrodia elata	31.590
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	31.370
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	36.880
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	30.630
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	28.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	17.240
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	17.000
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	25.180
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	21.260
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	43.790
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	26.720
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	41.980
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	41.980
SRP279888	Gastro	Gastrodia elata tuber	42.44
	Juven	Juvenile tuber	38.34
	Mother_Gastro	Mother tuber of Gastrodia elata	40.28
	Mother_Juven	Mother tuber of Juvenile	54.68