Detail information of GWHGAAEX000114/evm.TU.scaffold_0.235


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG18609.00E-44Nuclear protein export factor
nrgi|672144531|ref|XP_008796168.1|6.65E-156PREDICTED: SAC3 family protein 1 isoform X2 [Phoenix dactylifera]
trEMBLtr|M0TP41|M0TP41_MUSAM5.00E-154Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P09880_001}
TAIRAT3G062909.00E-44SAC3/GANP/Nin1/mts3/eIF-3 p25 family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141478226514840674+
Transcript Sequence

Network for GWHGAAEX000114

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03399.15SAC3_GANP583531.50E-83
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.660
SRR2545915Juvenile tuber10.360
SRP108465SRR5643513five period of Gastrodia elata3.470
SRR5643514five period of Gastrodia elata3.490
SRR5643515five period of Gastrodia elata2.530
SRR5643524five period of Gastrodia elata3.400
SRR5643525five period of Gastrodia elata1.470
SRR5643528five period of Gastrodia elata2.990
SRR5643658five period of Gastrodia elata2.500
SRR5643659five period of Gastrodia elata3.710
SRR5643660five period of Gastrodia elata4.100
SRR5643661five period of Gastrodia elata2.860
SRR5643662five period of Gastrodia elata3.260
SRR5643663five period of Gastrodia elata3.530
SRR5643664five period of Gastrodia elata3.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.860
SRR6049655Rhizomagastrodiae_C368-T10_good_14.220
SRR6049656Rhizomagastrodiae_C368-T07_good_14.720
SRR6049657Rhizomagastrodiae_C368-T07_good_16.420
SRR6049658Rhizomagastrodiae_C368-T04_good_14.210
SRR6049659Rhizomagastrodiae_C368-T04_good_14.400
SRR6049660Rhizomagastrodiae_C368-T01_good_14.360
SRR6049661Rhizomagastrodiae_C368-T04_good_14.970
SRR6049662Rhizomagastrodiae_C368-T01_good_14.830
SRR6049663Rhizomagastrodiae_C368-T01_good_12.820
SRR6049664Rhizomagastrodiae_C368-T10_good_13.160
SRR6049665Rhizomagastrodiae_C368-T10_good_13.160
SRP279888GastroGastrodia elata tuber 2.93
JuvenJuvenile tuber5.23
Mother_GastroMother tuber of Gastrodia elata 3.55
Mother_JuvenMother tuber of Juvenile 5.01