Detail information of GWHGAAEX000118/evm.TU.scaffold_0.241


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743788797|ref|XP_010922756.1|0PREDICTED: vacuolar-sorting receptor 1-like [Elaeis guineensis]
Swissprottr|P93026|VSR1_ARATH0Vacuolar-sorting receptor 1 (Precursor)
trEMBLtr|B9G923|B9G923_ORYSJ0Putative uncharacterized protein {ECO:0000313|EMBL:EEE51529.1}
TAIRAT3G528500vacuolar sorting receptor homolog 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141504214615064261-
Transcript Sequence

Network for GWHGAAEX000118

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02225.21PA591601.70E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.370
SRR2545915Juvenile tuber13.370
SRP108465SRR5643513five period of Gastrodia elata15.910
SRR5643514five period of Gastrodia elata17.470
SRR5643515five period of Gastrodia elata17.270
SRR5643524five period of Gastrodia elata16.510
SRR5643525five period of Gastrodia elata22.730
SRR5643528five period of Gastrodia elata21.190
SRR5643658five period of Gastrodia elata22.740
SRR5643659five period of Gastrodia elata13.440
SRR5643660five period of Gastrodia elata13.750
SRR5643661five period of Gastrodia elata15.700
SRR5643662five period of Gastrodia elata15.120
SRR5643663five period of Gastrodia elata14.920
SRR5643664five period of Gastrodia elata11.980
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.940
SRR6049655Rhizomagastrodiae_C368-T10_good_115.890
SRR6049656Rhizomagastrodiae_C368-T07_good_118.760
SRR6049657Rhizomagastrodiae_C368-T07_good_113.090
SRR6049658Rhizomagastrodiae_C368-T04_good_115.560
SRR6049659Rhizomagastrodiae_C368-T04_good_111.260
SRR6049660Rhizomagastrodiae_C368-T01_good_114.150
SRR6049661Rhizomagastrodiae_C368-T04_good_112.540
SRR6049662Rhizomagastrodiae_C368-T01_good_121.730
SRR6049663Rhizomagastrodiae_C368-T01_good_122.030
SRR6049664Rhizomagastrodiae_C368-T10_good_120.560
SRR6049665Rhizomagastrodiae_C368-T10_good_120.560
SRP279888GastroGastrodia elata tuber 10.94
JuvenJuvenile tuber13.80
Mother_GastroMother tuber of Gastrodia elata 18.99
Mother_JuvenMother tuber of Juvenile 10.94