Detail information of GWHGAAEX000124/evm.TU.scaffold_0.253


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|255565935|ref|XP_002523956.1|6.78E-45RAB6-interacting protein, putative [Ricinus communis]
trEMBLtr|B9SD87|B9SD87_RICCO3.00E-45RAB6-interacting protein, putative {ECO:0000313|EMBL:EEF38443.1}
trEMBLtr|B9SD87|B9SD87_RICCO3.00E-11RAB6-interacting protein, putative {ECO:0000313|EMBL:EEF38443.1}
TAIRAT2G305003.00E-34Kinase interacting (KIP1-like) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141538972615391566-
Transcript Sequence

Network for GWHGAAEX000124

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07765.11KIP111816.30E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003779Molecular Functionactin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms6.960
SRR2545915Juvenile tuber7.830
SRP108465SRR5643513five period of Gastrodia elata11.950
SRR5643514five period of Gastrodia elata8.980
SRR5643515five period of Gastrodia elata9.520
SRR5643524five period of Gastrodia elata8.570
SRR5643525five period of Gastrodia elata3.730
SRR5643528five period of Gastrodia elata3.250
SRR5643658five period of Gastrodia elata4.570
SRR5643659five period of Gastrodia elata4.500
SRR5643660five period of Gastrodia elata3.090
SRR5643661five period of Gastrodia elata4.490
SRR5643662five period of Gastrodia elata3.200
SRR5643663five period of Gastrodia elata3.040
SRR5643664five period of Gastrodia elata2.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.360
SRR6049655Rhizomagastrodiae_C368-T10_good_116.930
SRR6049656Rhizomagastrodiae_C368-T07_good_116.450
SRR6049657Rhizomagastrodiae_C368-T07_good_118.360
SRR6049658Rhizomagastrodiae_C368-T04_good_116.710
SRR6049659Rhizomagastrodiae_C368-T04_good_118.970
SRR6049660Rhizomagastrodiae_C368-T01_good_113.470
SRR6049661Rhizomagastrodiae_C368-T04_good_120.820
SRR6049662Rhizomagastrodiae_C368-T01_good_111.410
SRR6049663Rhizomagastrodiae_C368-T01_good_110.000
SRR6049664Rhizomagastrodiae_C368-T10_good_125.230
SRR6049665Rhizomagastrodiae_C368-T10_good_125.230
SRP279888GastroGastrodia elata tuber 1.81
JuvenJuvenile tuber7.40
Mother_GastroMother tuber of Gastrodia elata 10.93
Mother_JuvenMother tuber of Juvenile 7.47