Detail information of GWHGAAEX000128/evm.TU.scaffold_0.259


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|407461739|ref|YP_006773056.1|1.00E-14thioredoxin [Candidatus Nitrosopumilus koreensis AR1]
KOGKOG09074.00E-48Thioredoxin
nrgi|115434738|ref|NP_001042127.1|5.98E-57Os01g0168200 [Oryza sativa Japonica Group]
Swissprottr|Q9AS75|TRH41_ORYSJ3.00E-59Thioredoxin H4-1
trEMBLtr|I1NKL0|I1NKL0_ORYGL2.00E-57Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}
TAIRAT3G087104.00E-48thioredoxin H-type 9

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141549091915511546-
Transcript Sequence

Network for GWHGAAEX000128

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.19Thioredoxin1041982.50E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03671trxA NOD-like receptor signaling pathway map04621

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.380
SRR2545915Juvenile tuber17.850
SRP108465SRR5643513five period of Gastrodia elata18.660
SRR5643514five period of Gastrodia elata17.630
SRR5643515five period of Gastrodia elata22.680
SRR5643524five period of Gastrodia elata21.720
SRR5643525five period of Gastrodia elata32.350
SRR5643528five period of Gastrodia elata36.870
SRR5643658five period of Gastrodia elata26.910
SRR5643659five period of Gastrodia elata25.190
SRR5643660five period of Gastrodia elata19.750
SRR5643661five period of Gastrodia elata21.520
SRR5643662five period of Gastrodia elata27.680
SRR5643663five period of Gastrodia elata27.550
SRR5643664five period of Gastrodia elata23.070
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.450
SRR6049655Rhizomagastrodiae_C368-T10_good_18.340
SRR6049656Rhizomagastrodiae_C368-T07_good_121.600
SRR6049657Rhizomagastrodiae_C368-T07_good_117.360
SRR6049658Rhizomagastrodiae_C368-T04_good_113.830
SRR6049659Rhizomagastrodiae_C368-T04_good_116.630
SRR6049660Rhizomagastrodiae_C368-T01_good_115.370
SRR6049661Rhizomagastrodiae_C368-T04_good_116.390
SRR6049662Rhizomagastrodiae_C368-T01_good_120.790
SRR6049663Rhizomagastrodiae_C368-T01_good_117.020
SRR6049664Rhizomagastrodiae_C368-T10_good_122.060
SRR6049665Rhizomagastrodiae_C368-T10_good_122.060
SRP279888GastroGastrodia elata tuber 19.50
JuvenJuvenile tuber14.87
Mother_GastroMother tuber of Gastrodia elata 10.09
Mother_JuvenMother tuber of Juvenile 10.62