Detail information of GWHGAAEX000136/evm.TU.scaffold_0.272


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG08004.00E-66FOG: Predicted E3 ubiquitin ligase
nrgi|695053723|ref|XP_009414967.1|4.98E-152PREDICTED: uncharacterized protein LOC103995940 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TUQ2|M0TUQ2_MUSAM4.00E-151Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P29490_001}
TAIRAT3G108104.00E-66zinc finger (C3HC4-type RING finger) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141595772615978955-
Transcript Sequence

Network for GWHGAAEX000136

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.720
SRR2545915Juvenile tuber12.640
SRP108465SRR5643513five period of Gastrodia elata11.560
SRR5643514five period of Gastrodia elata9.240
SRR5643515five period of Gastrodia elata12.230
SRR5643524five period of Gastrodia elata11.880
SRR5643525five period of Gastrodia elata30.860
SRR5643528five period of Gastrodia elata26.330
SRR5643658five period of Gastrodia elata47.680
SRR5643659five period of Gastrodia elata15.420
SRR5643660five period of Gastrodia elata14.770
SRR5643661five period of Gastrodia elata16.240
SRR5643662five period of Gastrodia elata13.910
SRR5643663five period of Gastrodia elata18.140
SRR5643664five period of Gastrodia elata13.310
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_19.630
SRR6049655Rhizomagastrodiae_C368-T10_good_19.240
SRR6049656Rhizomagastrodiae_C368-T07_good_18.670
SRR6049657Rhizomagastrodiae_C368-T07_good_17.410
SRR6049658Rhizomagastrodiae_C368-T04_good_18.550
SRR6049659Rhizomagastrodiae_C368-T04_good_14.970
SRR6049660Rhizomagastrodiae_C368-T01_good_17.030
SRR6049661Rhizomagastrodiae_C368-T04_good_110.030
SRR6049662Rhizomagastrodiae_C368-T01_good_110.260
SRR6049663Rhizomagastrodiae_C368-T01_good_17.350
SRR6049664Rhizomagastrodiae_C368-T10_good_17.240
SRR6049665Rhizomagastrodiae_C368-T10_good_17.240
SRP279888GastroGastrodia elata tuber 14.10
JuvenJuvenile tuber5.69
Mother_GastroMother tuber of Gastrodia elata 11.49
Mother_JuvenMother tuber of Juvenile 7.63