Detail information of GWHGAAEX000146/evm.TU.scaffold_0.285


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743851878|ref|XP_010940248.1|1.93E-42PREDICTED: uncharacterized protein LOC105058887 isoform X1 [Elaeis guineensis]
trEMBLtr|M0S0V4|M0S0V4_MUSAM1.00E-40Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P17960_001}
TAIRAT1G424804.00E-24Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141625750116346570-
Transcript Sequence

Network for GWHGAAEX000146

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF11938.7DUF3456401711.50E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.830
SRR2545915Juvenile tuber30.700
SRP108465SRR5643513five period of Gastrodia elata13.700
SRR5643514five period of Gastrodia elata14.590
SRR5643515five period of Gastrodia elata15.160
SRR5643524five period of Gastrodia elata13.130
SRR5643525five period of Gastrodia elata26.930
SRR5643528five period of Gastrodia elata29.330
SRR5643658five period of Gastrodia elata29.210
SRR5643659five period of Gastrodia elata17.000
SRR5643660five period of Gastrodia elata22.600
SRR5643661five period of Gastrodia elata17.770
SRR5643662five period of Gastrodia elata17.180
SRR5643663five period of Gastrodia elata20.950
SRR5643664five period of Gastrodia elata17.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.750
SRR6049655Rhizomagastrodiae_C368-T10_good_118.890
SRR6049656Rhizomagastrodiae_C368-T07_good_17.470
SRR6049657Rhizomagastrodiae_C368-T07_good_19.740
SRR6049658Rhizomagastrodiae_C368-T04_good_12.260
SRR6049659Rhizomagastrodiae_C368-T04_good_11.040
SRR6049660Rhizomagastrodiae_C368-T01_good_14.300
SRR6049661Rhizomagastrodiae_C368-T04_good_13.170
SRR6049662Rhizomagastrodiae_C368-T01_good_14.360
SRR6049663Rhizomagastrodiae_C368-T01_good_12.110
SRR6049664Rhizomagastrodiae_C368-T10_good_121.270
SRR6049665Rhizomagastrodiae_C368-T10_good_121.270
SRP279888GastroGastrodia elata tuber 19.98
JuvenJuvenile tuber17.36
Mother_GastroMother tuber of Gastrodia elata 14.35
Mother_JuvenMother tuber of Juvenile 14.04