Detail information of GWHGAAEX000158/evm.TU.scaffold_0.304
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|262198528|ref|YP_003269737.1| | 3.00E-66 | hydroxyacylglutathione hydrolase [Haliangium ochraceum DSM 14365] |
| KOG | KOG0813 | 4.00E-143 | Glyoxylase |
| nr | gi|743891582|ref|XP_010911346.1| | 1.24E-155 | PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Elaeis guineensis] |
| Swissprot | tr|O24496|GLO2C_ARATH | 1.00E-143 | Hydroxyacylglutathione hydrolase cytoplasmic |
| trEMBL | tr|M5XK60|M5XK60_PRUPE | 7.00E-152 | Uncharacterized protein {ECO:0000313|EMBL:EMJ19420.1} |
| TAIR | AT3G10850 | 4.00E-143 | Metallo-hydrolase/oxidoreductase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 17197715 | 17227530 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000158
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00753.26 | Lactamase_B | 15 | 156 | 2.50E-09 |
| PF16123.4 | HAGH_C | 175 | 256 | 5.30E-28 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01069 | gloB, gloC, HAGH | Metabolic pathways | map01100 |
| Pyruvate metabolism | map00620 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0019243 | Biological Process | methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione |
| GO:0004416 | Molecular Function | hydroxyacylglutathione hydrolase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 128.370 |
| SRR2545915 | Juvenile tuber | 128.630 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 135.120 |
| SRR5643514 | five period of Gastrodia elata | 145.600 | |
| SRR5643515 | five period of Gastrodia elata | 143.870 | |
| SRR5643524 | five period of Gastrodia elata | 156.040 | |
| SRR5643525 | five period of Gastrodia elata | 136.700 | |
| SRR5643528 | five period of Gastrodia elata | 152.390 | |
| SRR5643658 | five period of Gastrodia elata | 114.510 | |
| SRR5643659 | five period of Gastrodia elata | 127.390 | |
| SRR5643660 | five period of Gastrodia elata | 132.740 | |
| SRR5643661 | five period of Gastrodia elata | 135.520 | |
| SRR5643662 | five period of Gastrodia elata | 128.530 | |
| SRR5643663 | five period of Gastrodia elata | 126.810 | |
| SRR5643664 | five period of Gastrodia elata | 125.350 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 109.650 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 119.010 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 129.590 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 103.170 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 104.790 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 102.980 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 96.980 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 108.610 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 116.730 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 106.610 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 139.790 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 139.790 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 102.88 |
| Juven | Juvenile tuber | 143.24 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 73.19 | |
| Mother_Juven | Mother tuber of Juvenile | 132.27 |