Detail information of GWHGAAEX000163/evm.TU.scaffold_0.308


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|430742304|ref|YP_007201433.1|8.00E-25protein kinase family protein [Singulisphaera acidiphila DSM 18658]
KOGKOG11870Serine/threonine protein kinase
nrgi|695045381|ref|XP_009410482.1|0PREDICTED: serine/threonine-protein kinase At5g01020-like isoform X1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q8GXZ3|Y5102_ARATH0Serine/threonine-protein kinase At5g01020
trEMBLtr|M0TJL9|M0TJL9_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P21830_001}
TAIRAT5G010200Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141753006517557775-
Transcript Sequence

Network for GWHGAAEX000163

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr843561.90E-47
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.990
SRR2545915Juvenile tuber17.190
SRP108465SRR5643513five period of Gastrodia elata25.090
SRR5643514five period of Gastrodia elata35.270
SRR5643515five period of Gastrodia elata25.030
SRR5643524five period of Gastrodia elata25.280
SRR5643525five period of Gastrodia elata83.530
SRR5643528five period of Gastrodia elata68.220
SRR5643658five period of Gastrodia elata85.870
SRR5643659five period of Gastrodia elata13.760
SRR5643660five period of Gastrodia elata16.380
SRR5643661five period of Gastrodia elata12.100
SRR5643662five period of Gastrodia elata16.660
SRR5643663five period of Gastrodia elata19.150
SRR5643664five period of Gastrodia elata19.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.890
SRR6049655Rhizomagastrodiae_C368-T10_good_118.300
SRR6049656Rhizomagastrodiae_C368-T07_good_126.920
SRR6049657Rhizomagastrodiae_C368-T07_good_125.040
SRR6049658Rhizomagastrodiae_C368-T04_good_119.010
SRR6049659Rhizomagastrodiae_C368-T04_good_117.090
SRR6049660Rhizomagastrodiae_C368-T01_good_120.610
SRR6049661Rhizomagastrodiae_C368-T04_good_118.210
SRR6049662Rhizomagastrodiae_C368-T01_good_130.520
SRR6049663Rhizomagastrodiae_C368-T01_good_123.100
SRR6049664Rhizomagastrodiae_C368-T10_good_130.390
SRR6049665Rhizomagastrodiae_C368-T10_good_130.390
SRP279888GastroGastrodia elata tuber 23.85
JuvenJuvenile tuber26.55
Mother_GastroMother tuber of Gastrodia elata 25.42
Mother_JuvenMother tuber of Juvenile 21.30