Detail information of GWHGAAEX000173/evm.TU.scaffold_0.330


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218667248|ref|YP_002426386.1|9.00E-10thioredoxin [Acidithiobacillus ferrooxidans ATCC 23270]
KOGKOG09079.00E-86Thioredoxin
nrgi|672119077|ref|XP_008782765.1|9.82E-100PREDICTED: thioredoxin-like 1-2, chloroplastic [Phoenix dactylifera]
Swissprottr|Q10M18|TRL12_ORYSJ1.00E-90Thioredoxin-like 1-2, chloroplastic (Precursor)
trEMBLtr|K4ADJ0|K4ADJ0_SETIT1.00E-96Uncharacterized protein {ECO:0000313|EnsemblPlants:Si036947m}
TAIRAT1G085709.00E-86atypical CYS HIS rich thioredoxin 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141828055618283807+
Transcript Sequence

Network for GWHGAAEX000173

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.19Thioredoxin1081772.70E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0045454Biological Processcell redox homeostasis

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.090
SRR2545915Juvenile tuber49.130
SRP108465SRR5643513five period of Gastrodia elata53.820
SRR5643514five period of Gastrodia elata49.270
SRR5643515five period of Gastrodia elata53.450
SRR5643524five period of Gastrodia elata50.210
SRR5643525five period of Gastrodia elata118.660
SRR5643528five period of Gastrodia elata110.680
SRR5643658five period of Gastrodia elata133.990
SRR5643659five period of Gastrodia elata39.210
SRR5643660five period of Gastrodia elata43.090
SRR5643661five period of Gastrodia elata36.240
SRR5643662five period of Gastrodia elata36.310
SRR5643663five period of Gastrodia elata38.290
SRR5643664five period of Gastrodia elata36.770
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_148.480
SRR6049655Rhizomagastrodiae_C368-T10_good_143.390
SRR6049656Rhizomagastrodiae_C368-T07_good_152.390
SRR6049657Rhizomagastrodiae_C368-T07_good_150.750
SRR6049658Rhizomagastrodiae_C368-T04_good_176.870
SRR6049659Rhizomagastrodiae_C368-T04_good_199.260
SRR6049660Rhizomagastrodiae_C368-T01_good_151.680
SRR6049661Rhizomagastrodiae_C368-T04_good_159.830
SRR6049662Rhizomagastrodiae_C368-T01_good_133.020
SRR6049663Rhizomagastrodiae_C368-T01_good_145.640
SRR6049664Rhizomagastrodiae_C368-T10_good_150.150
SRR6049665Rhizomagastrodiae_C368-T10_good_150.150
SRP279888GastroGastrodia elata tuber 56.59
JuvenJuvenile tuber59.68
Mother_GastroMother tuber of Gastrodia elata 148.34
Mother_JuvenMother tuber of Juvenile 136.33