Detail information of GWHGAAEX000177/evm.TU.scaffold_0.334


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672150312|ref|XP_008797331.1|9.42E-145PREDICTED: expansin-A15-like [Phoenix dactylifera]
Swissprottr|O80622|EXP15_ARATH1.00E-135Expansin-A15 (Precursor)
trEMBLtr|B9SBL9|B9SBL9_RICCO2.00E-142Alpha-expansin 1, putative {ECO:0000313|EMBL:EEF38967.1}
TAIRAT2G030906.00E-135expansin A15

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141847048218472522+
Transcript Sequence

Network for GWHGAAEX000177

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03330.17DPBB_1611468.60E-24
PF01357.20Pollen_allerg_11572344.10E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009664Biological Processplant-type cell wall organization
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.950
SRR2545915Juvenile tuber56.050
SRP108465SRR5643513five period of Gastrodia elata316.570
SRR5643514five period of Gastrodia elata178.570
SRR5643515five period of Gastrodia elata53.880
SRR5643524five period of Gastrodia elata174.830
SRR5643525five period of Gastrodia elata6.750
SRR5643528five period of Gastrodia elata9.500
SRR5643658five period of Gastrodia elata16.460
SRR5643659five period of Gastrodia elata5.590
SRR5643660five period of Gastrodia elata2.030
SRR5643661five period of Gastrodia elata3.380
SRR5643662five period of Gastrodia elata4.560
SRR5643663five period of Gastrodia elata3.200
SRR5643664five period of Gastrodia elata5.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1173.790
SRR6049655Rhizomagastrodiae_C368-T10_good_1289.410
SRR6049656Rhizomagastrodiae_C368-T07_good_1343.550
SRR6049657Rhizomagastrodiae_C368-T07_good_1116.530
SRR6049658Rhizomagastrodiae_C368-T04_good_1176.220
SRR6049659Rhizomagastrodiae_C368-T04_good_1107.430
SRR6049660Rhizomagastrodiae_C368-T01_good_1128.260
SRR6049661Rhizomagastrodiae_C368-T04_good_1232.110
SRR6049662Rhizomagastrodiae_C368-T01_good_1324.880
SRR6049663Rhizomagastrodiae_C368-T01_good_1133.730
SRR6049664Rhizomagastrodiae_C368-T10_good_1365.900
SRR6049665Rhizomagastrodiae_C368-T10_good_1365.900
SRP279888GastroGastrodia elata tuber 21.50
JuvenJuvenile tuber733.24
Mother_GastroMother tuber of Gastrodia elata 50.49
Mother_JuvenMother tuber of Juvenile 70.62