Detail information of GWHGAAEX000180/evm.TU.scaffold_0.341


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743843700|ref|XP_010938141.1|2.46E-115PREDICTED: cyclic dof factor 3-like [Elaeis guineensis]
Swissprottr|Q93ZL5|CDF2_ARATH3.00E-76Cyclic dof factor 2
trEMBLtr|E6PBM2|E6PBM2_SORBI1.00E-93Dof-type zinc finger protein 15 {ECO:0000313|EMBL:DAA34018.1}
TAIRAT5G396605.00E-75cycling DOF factor 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141862506518648020-
Transcript Sequence

Network for GWHGAAEX000180

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02701.14zf-Dof1241811.30E-32
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.070
SRR2545915Juvenile tuber12.870
SRP108465SRR5643513five period of Gastrodia elata23.840
SRR5643514five period of Gastrodia elata21.570
SRR5643515five period of Gastrodia elata20.030
SRR5643524five period of Gastrodia elata21.890
SRR5643525five period of Gastrodia elata21.410
SRR5643528five period of Gastrodia elata20.130
SRR5643658five period of Gastrodia elata22.680
SRR5643659five period of Gastrodia elata11.650
SRR5643660five period of Gastrodia elata8.240
SRR5643661five period of Gastrodia elata7.570
SRR5643662five period of Gastrodia elata10.250
SRR5643663five period of Gastrodia elata8.960
SRR5643664five period of Gastrodia elata4.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.310
SRR6049655Rhizomagastrodiae_C368-T10_good_123.660
SRR6049656Rhizomagastrodiae_C368-T07_good_116.930
SRR6049657Rhizomagastrodiae_C368-T07_good_116.390
SRR6049658Rhizomagastrodiae_C368-T04_good_118.060
SRR6049659Rhizomagastrodiae_C368-T04_good_116.810
SRR6049660Rhizomagastrodiae_C368-T01_good_115.300
SRR6049661Rhizomagastrodiae_C368-T04_good_114.940
SRR6049662Rhizomagastrodiae_C368-T01_good_119.700
SRR6049663Rhizomagastrodiae_C368-T01_good_120.340
SRR6049664Rhizomagastrodiae_C368-T10_good_120.950
SRR6049665Rhizomagastrodiae_C368-T10_good_120.950
SRP279888GastroGastrodia elata tuber 5.42
JuvenJuvenile tuber21.57
Mother_GastroMother tuber of Gastrodia elata 24.39
Mother_JuvenMother tuber of Juvenile 34.45