Detail information of GWHGAAEX000184/evm.TU.scaffold_0.345


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG23972.00E-60Protein kinase C substrate, 80 KD protein, heavy chain
nrgi|672116128|ref|XP_008781219.1|0PREDICTED: glucosidase 2 subunit beta-like [Phoenix dactylifera]
Swissprottr|A2WNF5|GLU2B_ORYSI2.00E-180Glucosidase 2 subunit beta (Precursor)
trEMBLtr|J3KYS4|J3KYS4_ORYBR2.00E-180Uncharacterized protein {ECO:0000313|EnsemblPlants:OB01G21300.1}
TAIRAT5G563602.00E-60calmodulin-binding protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141891209718995699+
Transcript Sequence

Network for GWHGAAEX000184

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12999.6PRKCSH-like191722.00E-32
PF13015.5PRKCSH_14215623.60E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K08288PRKCSH Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.700
SRR2545915Juvenile tuber40.510
SRP108465SRR5643513five period of Gastrodia elata28.210
SRR5643514five period of Gastrodia elata27.050
SRR5643515five period of Gastrodia elata25.070
SRR5643524five period of Gastrodia elata28.050
SRR5643525five period of Gastrodia elata34.470
SRR5643528five period of Gastrodia elata31.150
SRR5643658five period of Gastrodia elata33.440
SRR5643659five period of Gastrodia elata15.570
SRR5643660five period of Gastrodia elata14.510
SRR5643661five period of Gastrodia elata14.720
SRR5643662five period of Gastrodia elata14.570
SRR5643663five period of Gastrodia elata16.980
SRR5643664five period of Gastrodia elata15.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.770
SRR6049655Rhizomagastrodiae_C368-T10_good_121.970
SRR6049656Rhizomagastrodiae_C368-T07_good_128.820
SRR6049657Rhizomagastrodiae_C368-T07_good_125.860
SRR6049658Rhizomagastrodiae_C368-T04_good_124.280
SRR6049659Rhizomagastrodiae_C368-T04_good_124.010
SRR6049660Rhizomagastrodiae_C368-T01_good_123.930
SRR6049661Rhizomagastrodiae_C368-T04_good_124.900
SRR6049662Rhizomagastrodiae_C368-T01_good_126.150
SRR6049663Rhizomagastrodiae_C368-T01_good_122.840
SRR6049664Rhizomagastrodiae_C368-T10_good_129.040
SRR6049665Rhizomagastrodiae_C368-T10_good_129.040
SRP279888GastroGastrodia elata tuber 18.00
JuvenJuvenile tuber20.54
Mother_GastroMother tuber of Gastrodia elata 22.76
Mother_JuvenMother tuber of Juvenile 19.38