Gene detail

Detail information of GWHGAAEX000185/evm.TU.scaffold_0.346

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672137541\|ref\|XP_008792499.1\|	1.15E-107	PREDICTED: uncharacterized protein LOC103709088 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|M0SMP5\|M0SMP5_MUSAM	6.00E-100	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr4P10280_001}
TAIR	AT3G13420	2.00E-11	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	19030020	19050541	-

Transcript Sequence
>GWHTAAEX000185 TATGGAGGCACGTAATACGTATGAAATTCTTCGAATAGAGAGAGGGTAACAAGCTCATAGTCTCCCTCCGAAACCATTCACGGCGCGTTCACTTCCTTCCATCTCTCTGAAGCTTCTTCAAATGTAGAGTGGAGAGATTCCTTTGTCTTTTTCTCTTATTCGGCGGACTTACTCGTTTCTTCGTCGCATTTTTTTTTCTTCACCCAATTGGGGCTATACTTTCAATAATGCCCCTTTTATCTCCACATCTGGGCCTTCAGATTCGAATGTGGCTACGGGATTATGATCGAATTCAGTCAATTTCGGTTATCCTCATTTACGTCCAAATTGTTTGCTCTTTGTTGGGATCGTTGGGAGCTCTGTTCAATGGTGTGCTGTTGGTTAATTTGGTGATAGCTCTCTTTGCACTTATTGCTATAGAAAGCAGTAGCCAGAGCCTCGGACGCACTTATGCAGCGCTTCTCTTCTGCGCAATCTTGCTTGATATTGCATGGTTTATACTTTTCTCGCACACTATATGGAGCTTTGGTGCAGAAAAGTATGGGGCATCTTTTGTCTTCTCTGTTAGACTTGCATTCTTAATGCAAATCATTGGTTTTTCAGTGAGGTTCTTCTCCTCATTCTTCTGGATTCATATGTATAGACTGGGAGTTACAACAGCCAATAATTTGTCCTATCAAGATATAGATTTTCACTTGAGAAATGATTATATAAATCCCACGCCTAATGTTATAGCAAGACAGAACTCTAATTCCAGTGATATATTAGGCGGCTCCATATATGATCCAGCTTATTATTCTTCTCTTTTTGAGGATGCCCACGACAATTGCAACGAAGAAGAAGGCAGGCTAATAAGCTGCCGCGATGGGGGATCCACATCAGCCGCCCGATCGCCACGACTCAAATCCTGCATCAGCCGGTCATTTCAGGCTTCCGATAGAACTTATATTTACACAGACCAAAGCATGAATGCAGTGTCATTATGAGGCTTGGATCGCGGGCGTTGGAAGCAAAAATGGTATTGTGAGAAAAATGATGAATGGTTAACACAGGAAGCATTCTCCAGTTATCATTCCACCGAAAAAAATAATCATGGTTACAGCTCGCTCAGCCCTACCTTCACTGGTCTCTACCAGGAAGGTGCCGATCTTGTCCATGGCCTTCTTCATGTTCAGGCTCTGCTTGGAGGTCCTTGGCTCTGGGACAGGGTATTTGATTGGATTAACTGCATCACATGCTTTTCTGCATTTTAGCTCTACCAGAAACCAGAAGGGCTCATGGAGCTGCTGAAATTGTGAGGAACTGGAAGCAGGTGATCACTTGTGAAGGAAGAATAGCAAATTTTAACTCTCGGCTCAGTAATTAAGGTAACTTAGTAAAATTAGTGTCGTAGGCAACTTCTATTCGAATCTGGAATTAGAAAAATTTGCAATGCTTCTAGAGATGTCTGTTAAAATGAACGGCCATTTCTCTAAGTGTACCCTGAATGTAACTCAACTAAACATTAAGATGCAATATTGGATATAGTTCTTAATCAATCATACTCGACTATTATAGCG

Network for GWHGAAEX000185

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	7.030
SRP064423	SRR2545915	Juvenile tuber	7.060
SRP108465	SRR5643513	five period of Gastrodia elata	4.400
	SRR5643514	five period of Gastrodia elata	4.150
	SRR5643515	five period of Gastrodia elata	4.930
	SRR5643524	five period of Gastrodia elata	4.870
	SRR5643525	five period of Gastrodia elata	9.870
	SRR5643528	five period of Gastrodia elata	8.510
	SRR5643658	five period of Gastrodia elata	8.960
	SRR5643659	five period of Gastrodia elata	5.530
	SRR5643660	five period of Gastrodia elata	4.340
	SRR5643661	five period of Gastrodia elata	4.990
	SRR5643662	five period of Gastrodia elata	4.520
	SRR5643663	five period of Gastrodia elata	5.210
	SRR5643664	five period of Gastrodia elata	3.940
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	4.370
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.510
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.400
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.260
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.170
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.730
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.040
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	3.570
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	4.820
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.600
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.600
SRP279888	Gastro	Gastrodia elata tuber	3.56
	Juven	Juvenile tuber	3.82
	Mother_Gastro	Mother tuber of Gastrodia elata	7.85
	Mother_Juven	Mother tuber of Juvenile	3.57