Detail information of GWHGAAEX000196/evm.TU.scaffold_0.361


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG47533.00E-41Predicted membrane protein
nrgi|743862922|ref|XP_010943669.1|1.51E-60PREDICTED: transmembrane protein 230-like isoform X2 [Elaeis guineensis]
trEMBLtr|M0RR78|M0RR78_MUSAM3.00E-59Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P10980_001}
TAIRAT3G291703.00E-41Eukaryotic protein of unknown function (DUF872)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000141943964619449775+
Transcript Sequence

Network for GWHGAAEX000196

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05915.11DUF872111179.70E-29
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms22.790
SRR2545915Juvenile tuber23.190
SRP108465SRR5643513five period of Gastrodia elata13.880
SRR5643514five period of Gastrodia elata12.520
SRR5643515five period of Gastrodia elata13.760
SRR5643524five period of Gastrodia elata14.560
SRR5643525five period of Gastrodia elata18.750
SRR5643528five period of Gastrodia elata18.700
SRR5643658five period of Gastrodia elata20.490
SRR5643659five period of Gastrodia elata13.570
SRR5643660five period of Gastrodia elata16.840
SRR5643661five period of Gastrodia elata13.360
SRR5643662five period of Gastrodia elata21.330
SRR5643663five period of Gastrodia elata18.140
SRR5643664five period of Gastrodia elata16.010
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.210
SRR6049655Rhizomagastrodiae_C368-T10_good_122.920
SRR6049656Rhizomagastrodiae_C368-T07_good_115.400
SRR6049657Rhizomagastrodiae_C368-T07_good_112.470
SRR6049658Rhizomagastrodiae_C368-T04_good_113.230
SRR6049659Rhizomagastrodiae_C368-T04_good_119.620
SRR6049660Rhizomagastrodiae_C368-T01_good_112.590
SRR6049661Rhizomagastrodiae_C368-T04_good_117.790
SRR6049662Rhizomagastrodiae_C368-T01_good_122.670
SRR6049663Rhizomagastrodiae_C368-T01_good_121.080
SRR6049664Rhizomagastrodiae_C368-T10_good_120.390
SRR6049665Rhizomagastrodiae_C368-T10_good_120.390
SRP279888GastroGastrodia elata tuber 30.43
JuvenJuvenile tuber18.45
Mother_GastroMother tuber of Gastrodia elata 37.27
Mother_JuvenMother tuber of Juvenile 39.27