Detail information of GWHGAAEX000218/evm.TU.scaffold_0.388


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG02234.00E-87Aquaporin (major intrinsic protein family)
nrgi|743884994|ref|XP_010909819.1|4.29E-113PREDICTED: aquaporin SIP2-1-like [Elaeis guineensis]
Swissprottr|Q9M1K3|SIP21_ARATH1.00E-87Probable aquaporin SIP2-1
trEMBLtr|M0T285|M0T285_MUSAM5.00E-96Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P27600_001}
TAIRAT3G569504.00E-87small and basic intrinsic protein 2;1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142006254620064227+
Transcript Sequence

Network for GWHGAAEX000218

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00230.19MIP642164.70E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0015267Molecular Functionchannel activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.000
SRR2545915Juvenile tuber13.050
SRP108465SRR5643513five period of Gastrodia elata17.140
SRR5643514five period of Gastrodia elata23.950
SRR5643515five period of Gastrodia elata19.440
SRR5643524five period of Gastrodia elata24.410
SRR5643525five period of Gastrodia elata17.470
SRR5643528five period of Gastrodia elata22.710
SRR5643658five period of Gastrodia elata15.830
SRR5643659five period of Gastrodia elata28.600
SRR5643660five period of Gastrodia elata20.080
SRR5643661five period of Gastrodia elata25.800
SRR5643662five period of Gastrodia elata22.040
SRR5643663five period of Gastrodia elata16.630
SRR5643664five period of Gastrodia elata17.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_134.440
SRR6049655Rhizomagastrodiae_C368-T10_good_116.340
SRR6049656Rhizomagastrodiae_C368-T07_good_138.520
SRR6049657Rhizomagastrodiae_C368-T07_good_126.940
SRR6049658Rhizomagastrodiae_C368-T04_good_137.960
SRR6049659Rhizomagastrodiae_C368-T04_good_138.980
SRR6049660Rhizomagastrodiae_C368-T01_good_149.800
SRR6049661Rhizomagastrodiae_C368-T04_good_139.830
SRR6049662Rhizomagastrodiae_C368-T01_good_142.350
SRR6049663Rhizomagastrodiae_C368-T01_good_153.590
SRR6049664Rhizomagastrodiae_C368-T10_good_138.000
SRR6049665Rhizomagastrodiae_C368-T10_good_138.000
SRP279888GastroGastrodia elata tuber 23.91
JuvenJuvenile tuber20.72
Mother_GastroMother tuber of Gastrodia elata 64.84
Mother_JuvenMother tuber of Juvenile 33.03