Detail information of GWHGAAEX000224/evm.TU.scaffold_0.394
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|301349391|gb|ADK74339.1| | 0 | bZIP transcription factor [Phalaenopsis amabilis] |
| Swissprot | tr|Q41558|HBP1C_WHEAT | 0 | Transcription factor HBP-1b(c1) (Fragment) |
| trEMBL | tr|E2ITW7|E2ITW7_PHAAB | 0 | BZIP transcription factor {ECO:0000313|EMBL:ADK74339.1} |
| TAIR | AT3G12250 | 0 | TGACG motif-binding factor 6 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 20236674 | 20265932 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000224
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00170.20 | bZIP_1 | 182 | 217 | 3.20E-07 |
| PF14144.5 | DOG1 | 264 | 339 | 6.20E-33 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bZIP |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14431 | TGA | Plant hormone signal transduction | map04075 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006351 | Biological Process | transcription, DNA-templated |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 64.950 |
| SRR2545915 | Juvenile tuber | 53.980 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 64.270 |
| SRR5643514 | five period of Gastrodia elata | 64.560 | |
| SRR5643515 | five period of Gastrodia elata | 67.260 | |
| SRR5643524 | five period of Gastrodia elata | 68.380 | |
| SRR5643525 | five period of Gastrodia elata | 82.290 | |
| SRR5643528 | five period of Gastrodia elata | 84.880 | |
| SRR5643658 | five period of Gastrodia elata | 82.270 | |
| SRR5643659 | five period of Gastrodia elata | 59.100 | |
| SRR5643660 | five period of Gastrodia elata | 62.810 | |
| SRR5643661 | five period of Gastrodia elata | 61.110 | |
| SRR5643662 | five period of Gastrodia elata | 59.550 | |
| SRR5643663 | five period of Gastrodia elata | 51.060 | |
| SRR5643664 | five period of Gastrodia elata | 55.440 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 71.360 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 45.480 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 69.890 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 77.040 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 85.860 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 101.610 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 82.360 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 75.450 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 55.000 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 66.260 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 54.150 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 54.150 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 72.46 |
| Juven | Juvenile tuber | 95.30 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 136.02 | |
| Mother_Juven | Mother tuber of Juvenile | 137.48 |