Detail information of GWHGAAEX000226/evm.TU.scaffold_0.397


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|427737935|ref|YP_007057479.1|2.00E-2250S ribosomal protein L11 methylase [Rivularia sp. PCC 7116]
KOGKOG14990Protein arginine N-methyltransferase PRMT1 and related enzymes
nrgi|743886371|ref|XP_010910129.1|0PREDICTED: probable protein arginine N-methyltransferase 3 isoform X1 [Elaeis guineensis]
Swissprottr|Q0WVD6|ANM3_ARATH0Probable protein arginine N-methyltransferase 3
trEMBLtr|M0SD47|M0SD47_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P09300_001}
TAIRAT3G122700protein arginine methyltransferase 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142036689820403431+
Transcript Sequence

Network for GWHGAAEX000226

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12756.6zf-C2H2_2511268.70E-09
PF08241.11Methyltransf_113054235.40E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006479Biological Processprotein methylation
GO:0003676Molecular Functionnucleic acid binding
GO:0008168Molecular Functionmethyltransferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms19.050
SRR2545915Juvenile tuber12.030
SRP108465SRR5643513five period of Gastrodia elata5.690
SRR5643514five period of Gastrodia elata5.630
SRR5643515five period of Gastrodia elata5.650
SRR5643524five period of Gastrodia elata5.460
SRR5643525five period of Gastrodia elata2.200
SRR5643528five period of Gastrodia elata1.650
SRR5643658five period of Gastrodia elata2.100
SRR5643659five period of Gastrodia elata12.430
SRR5643660five period of Gastrodia elata14.880
SRR5643661five period of Gastrodia elata12.280
SRR5643662five period of Gastrodia elata12.250
SRR5643663five period of Gastrodia elata11.290
SRR5643664five period of Gastrodia elata14.750
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.260
SRR6049655Rhizomagastrodiae_C368-T10_good_16.800
SRR6049656Rhizomagastrodiae_C368-T07_good_19.500
SRR6049657Rhizomagastrodiae_C368-T07_good_18.950
SRR6049658Rhizomagastrodiae_C368-T04_good_18.090
SRR6049659Rhizomagastrodiae_C368-T04_good_17.230
SRR6049660Rhizomagastrodiae_C368-T01_good_110.930
SRR6049661Rhizomagastrodiae_C368-T04_good_19.820
SRR6049662Rhizomagastrodiae_C368-T01_good_114.090
SRR6049663Rhizomagastrodiae_C368-T01_good_111.620
SRR6049664Rhizomagastrodiae_C368-T10_good_110.460
SRR6049665Rhizomagastrodiae_C368-T10_good_110.460
SRP279888GastroGastrodia elata tuber 14.43
JuvenJuvenile tuber15.74
Mother_GastroMother tuber of Gastrodia elata 3.32
Mother_JuvenMother tuber of Juvenile 5.32