Detail information of GWHGAAEX000230/evm.TU.scaffold_0.401


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|113474237|ref|YP_720298.1|3.00E-16glutaredoxin [Trichodesmium erythraeum IMS101]
KOGKOG04061.00E-94Glutathione S-transferase
nrgi|695056110|ref|XP_009416264.1|5.63E-113PREDICTED: protein IN2-1 homolog B-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q8H8U5|IN21B_ORYSJ4.00E-111Protein IN2-1 homolog B
trEMBLtr|M0TXD0|M0TXD0_MUSAM2.00E-113Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P04210_001}
TAIRAT3G550401.00E-94glutathione transferase lambda 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142046827420474838+
Transcript Sequence

Network for GWHGAAEX000230

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13417.5GST_N_3861611.10E-17
PF13410.5GST_C_22012657.00E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00799GST, gst Metabolic pathways map01100
Glutathione metabolismmap00480
Metabolism of xenobiotics by cytochrome P450map00980
Drug metabolism - cytochrome P450map00982
Drug metabolism - other enzymesmap00983
Longevity regulating pathway - wormmap04212

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms552.490
SRR2545915Juvenile tuber534.360
SRP108465SRR5643513five period of Gastrodia elata536.660
SRR5643514five period of Gastrodia elata511.930
SRR5643515five period of Gastrodia elata527.470
SRR5643524five period of Gastrodia elata380.620
SRR5643525five period of Gastrodia elata365.820
SRR5643528five period of Gastrodia elata2273.490
SRR5643658five period of Gastrodia elata517.480
SRR5643659five period of Gastrodia elata738.870
SRR5643660five period of Gastrodia elata1144.990
SRR5643661five period of Gastrodia elata661.420
SRR5643662five period of Gastrodia elata1265.290
SRR5643663five period of Gastrodia elata999.980
SRR5643664five period of Gastrodia elata1227.430
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1251.120
SRR6049655Rhizomagastrodiae_C368-T10_good_1364.290
SRR6049656Rhizomagastrodiae_C368-T07_good_1258.560
SRR6049657Rhizomagastrodiae_C368-T07_good_1250.360
SRR6049658Rhizomagastrodiae_C368-T04_good_1272.880
SRR6049659Rhizomagastrodiae_C368-T04_good_1271.980
SRR6049660Rhizomagastrodiae_C368-T01_good_1244.260
SRR6049661Rhizomagastrodiae_C368-T04_good_1251.190
SRR6049662Rhizomagastrodiae_C368-T01_good_1148.260
SRR6049663Rhizomagastrodiae_C368-T01_good_1193.170
SRR6049664Rhizomagastrodiae_C368-T10_good_1231.730
SRR6049665Rhizomagastrodiae_C368-T10_good_1231.730
SRP279888GastroGastrodia elata tuber 1,516.29
JuvenJuvenile tuber690.59
Mother_GastroMother tuber of Gastrodia elata 1,595.69
Mother_JuvenMother tuber of Juvenile 3,775.26