Detail information of GWHGAAEX000231/evm.TU.scaffold_0.402


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|720072726|ref|XP_010278470.1|1.85E-84PREDICTED: uncharacterized protein LOC104612652 [Nelumbo nucifera]
trEMBLtr|M0T794|M0T794_MUSAM2.00E-82Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P15460_001}
TAIRAT4G311304.00E-54Protein of unknown function (DUF1218)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142049766320500796-
Transcript Sequence

Network for GWHGAAEX000231

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06749.11DUF1218621554.20E-13
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.630
SRR2545915Juvenile tuber35.310
SRP108465SRR5643513five period of Gastrodia elata60.180
SRR5643514five period of Gastrodia elata98.860
SRR5643515five period of Gastrodia elata64.880
SRR5643524five period of Gastrodia elata89.340
SRR5643525five period of Gastrodia elata123.540
SRR5643528five period of Gastrodia elata109.990
SRR5643658five period of Gastrodia elata134.280
SRR5643659five period of Gastrodia elata58.040
SRR5643660five period of Gastrodia elata53.510
SRR5643661five period of Gastrodia elata52.370
SRR5643662five period of Gastrodia elata50.120
SRR5643663five period of Gastrodia elata54.680
SRR5643664five period of Gastrodia elata48.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_153.060
SRR6049655Rhizomagastrodiae_C368-T10_good_1100.770
SRR6049656Rhizomagastrodiae_C368-T07_good_166.280
SRR6049657Rhizomagastrodiae_C368-T07_good_149.980
SRR6049658Rhizomagastrodiae_C368-T04_good_158.240
SRR6049659Rhizomagastrodiae_C368-T04_good_149.130
SRR6049660Rhizomagastrodiae_C368-T01_good_156.260
SRR6049661Rhizomagastrodiae_C368-T04_good_155.160
SRR6049662Rhizomagastrodiae_C368-T01_good_165.830
SRR6049663Rhizomagastrodiae_C368-T01_good_168.150
SRR6049664Rhizomagastrodiae_C368-T10_good_185.470
SRR6049665Rhizomagastrodiae_C368-T10_good_185.470
SRP279888GastroGastrodia elata tuber 67.46
JuvenJuvenile tuber92.80
Mother_GastroMother tuber of Gastrodia elata 117.31
Mother_JuvenMother tuber of Juvenile 52.31