Gene detail

Detail information of GWHGAAEX000232/evm.TU.scaffold_0.405

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG0243	Kinesin-like protein
nr	gi\|743781115\|ref\|XP_010920768.1\|	PREDICTED: 125 kDa kinesin-related protein-like [Elaeis guineensis]
Swissprot	tr\|O23826\|K125_TOBAC	125 kDa kinesin-related protein
trEMBL	tr\|M0TXB6\|M0TXB6_MUSAM	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}
TAIR	AT3G45850	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	20608423	20625405	+

Transcript Sequence
>GWHTAAEX000232 GAATTATATAGCCTTAAATGACGCCGCATTATATTTCCCATATTATTTGATTAATCCATAATTAATAGTATCGTAACTGGGGACATGCAGGAAAGTAACAAGTCTCCCAATCGAAGAAGAGTCCCTCGATCCAGGATCCGTCTGCTGTCGAGTTCGCCGCCGGTTGGATCAGATCGCATCAGAATAGCCGGCTTCCGGATTGATCGGATTTTATAATATCATCTTGTCAACATACTTGGAGGGATCCGCCTTACTTCGCTGCGGCGTCTTGAATCGTCTTGGTGGGGAGAATTGGGAGATGGATAGATCGCATAAGAAAGAAAGGGGGGTGTCTGTCTCTCCTTCTAGTACTCCTAGATCGAGCGAGAAATATGGAAGAGATCTCCGATCTGCCGATGGAAGCGCGCATGTAAGCAATAAGAATGATAAGGATAAAGGCGTGAACGTTCAGGTCATCCTCCGATGCAGACCTCTGAATGAAGAAGAGGCCAGGCTGCGGACGCCTATGGTCATATCCTGCAACGAGCAGCGGCGGGAGGTTTTGGCAATGCAGAATATTGCAAACAAGCAGATTGACAGAACGTTTGTGTTTGACAAGGTTTTTGGCCCAACATCCCAACAAAAGGATTTGTTCAATCTATCTATCTGCCCAATTGTGAATGAGGTTCTCGAGGGATACAACTGTACGATTTTTGCTTATGGGCAGACTGGAACTGGCAAGACATACACTATGGAAGGTGGAGGGAAGAAGGCAAAGAATGGAGAGTTTCCGAGTGATTCTGGAGTGATCCCAAGGTCCGTTCGTCAAATTTTCGAAACGCTTGAAGCACAGTGTGCAGAATACAGCATGAAGGTTACTTTTTTAGAACTGTACAATGAGGAAATCACAGATCTTCTAACTCCCGATGAGCCAAAATTCTCAGATGACAAATCAAAGAAACCTATAGCATTAATGGAAGACGGGAAAGGAGGTGTGTTTGTTAGAGGGCTGGAGGAGGAGGTAGTTCGCTCTGCCAGTGAAATATACAAGATATTGGAGAAAGGATCTGCAAAGAGGCGTACTGCTGAGACTCTATTAAACAAACAAAGCAGTCGTTCTCATTCCATATTTTCTATTACAATTCACATCAAAGAGGTTACTCCAGAGGGGGAAGAAATGATTAAAATTGGGAAACTTAATCTTGTGGATTTAGCTGGCTCAGAGAATATATCAAGATCAGGTGCTAGAGATGGCAGGGCAAGGGAAGCTGGGGAGATCAATAAAAGTCTGCTTACTCTGGGCCGTGTTATTAATACACTAGTTGAGCATTCTGGCCACATTCCATACAGAGATAGCAAACTGACAAGACTATTGAGGGATTCCTTGGGTGGAAAAACTAAGACCTGCATCATTGCTACCATTTCTCCATCAATTTATTGTTTAGAAGAGACACTGAGCACATTAGATTATGCTCACCGTGCCAAAAATATAAAGAACAAGCCTGAGATTAATCAGAAGATGATGAAATCTGCAATGATCAAGGATCTATACTCTGAGATTGATCATCTTAAACAAGAGGTATATGCTGCTAGGGAGAAAAATGGCATTTATATTCCCAGGGATCGCTTTCTACAAGAAGAAGCTGAAAAGAAGGCCATGGCTGAAAAAATTGAGCGAATGGAAATAGAATTGGAATCCAAAGACAAGCAATTAGTTGAGCTTCGAGATGTTTACAATTCTCAACAAAAAATGTGTGCAGAACTTAGTGAAAAACTGAATAAGACTCAGAAAAAAATGGAGGACACTGAAAATCAACTACTTGACCTGGAAGAAAGATTTCAACAAGCAAAGCGCACTATAAAAGAAAAGGAATATTTGATTTCGAATCTTCTTCAATCAGAGAAATCACTTGTTGAGCGTGCGCATGGCCTTCAATCAGATCTAGAGAATGCAGCTGCTGATATTTCTGGATTGTTTTCTAAAATTGAGCGCAAAGATAAGATAGAGGAGGGCAACAGAATTCTTGTGCAGCGGTTTCAGTCTCAGTTGACTCAACAACTGGAAGTTTTGCATAAGACTGTATCTTCTTCTGTGGCACAACAGGAGAACCAACTGAAAGAAATGGAAGAAGACATGCAATCTTTTGTTTCTGCGAAGATTACGGCTACTGATGAACTTAGAGGGTTGGTTGAAAATTTGAAAGCCATGTATGGCTCTGGCATTAAAGTACTCGATGATTTAGCTGGAGAGCTAGATGAAAATTCTGGGTCAACTTTTGGGAAATTGAAATCACAAGTGCTAACACATTCTTCTGCTCTTGAGGATTGCTTTAAAGGTTTTGCTTCAGAGGCTGATAATTTGCTTAGTGAGCTTCAAAGTACCCTCTTTAAGCAAGAGGATAAATTAAATGCATTTGCGCAGCAGCAGCGTGAGGGTCATCTAAGAACTGTGGAGACAACACGTTCTATCTCGGATACAACTATGAATTTTTTTGATACTCTGGACATTCATGTTGCAAACTTAAGCAAAATTTTGGAAGAAACGCAGGCATCACAGTACCAGCAACTCAGCGAGCTTGAAAGAAAGTTTGAGGAATGTGCTGCCAATGAAGAAAAACAATTGCTGGAGAAGGTGGCAGAGATGCTGGCAAGCTCAAGTTCTAGGAAGTTAAGCTTGGTTCAAACGGCAGTTGACACTCTTAGAGCAAGCGCTGCTGATAGAACAAGCAATCTCCAAAAGGAAATGTCTAATGCTCAAGATTTTACCTCATCTGTCAAAGAAAAATGGATGGTTTACTTGGAAGAAACTGAAAAGAATTATCATCAGAACACTTCAAATGTAGAAAGCCGAAGATGCGGGCTGGAAGAAGGCATAAAAGACTGCATGGAAAATGTCAAAATGGGTTCAAGACAGTGGAAAGATGTTCAGGATGCTCTTCTGAGCTTGTGGAAAGGAAATGTTTCTTCAGTGGAGACTATTGTTTGGAATGGAATGGAGGCCAATCAGCTGTTACGAGCCAAGTTGTCTTCTGCCGCTTCGGTTGCGCTTGGGGATGTTCATAATGCTAACAACGGCCTTCATTCTTCCATAAACTGTTCCTTGAAACTTGATCACGATGCGTGCACGAACATTGACTCCATTATCATGCCTTCTCGCGGGGATCTTAAAAGCTTGAGGAACGGGCACTATCACAAGATCATCGAGATCTCCAATAGTGCCGGGAAATGCTTGGATGAGGAGTACATGGTGGATGAGCCTTCTTGTTTGACGCCGAAAAAGCGATCCATCAACCTGCCCAGTGTGGCTTCCATTGAAGAGCTGAGGACCCCTCCGATCGACGAGCTGCTCAAAGGTTTCTGGGATTCAAAATCTGCAGCAAAGCAAATAAATGGGGACACGAAGCATCTATCGGCAGCATTTGAGTCCCATTCACAGTCCTTCCGGGACTCTCGGCTTCCCCTCACAACGCTAAACTGAGTGCCTAATGTATACCTCCAATATGTGTACAGGTTAGAGGTTGCAATTTGTTCACCTTTCACAGATTGTTTCAGTGTCTAAAAGGGTATTTGTTATGTATATCAGTGCCAGTGGCAGAAGGAAGAGCCCTGGTTAGGCCATCATTTCTGAAAGACTTTTTCACTGTTATTTCATTGAACCAGTGAGCATTATATATAATACATATAGAAATGGTGTTGATTGATGATGCCATCGTGTGTACTGTATGTATGCATTTTAGGTAATACTATGTTTATTACTTCATAATTTCTTAAGAATATATTTTGAATGCA

Network for GWHGAAEX000232

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.22	Kinesin	55	391	7.90E-118

Protein Sequence

>GWHPAAEX000232
MDRSHKKERGVSVSPSSTPRSSEKYGRDLRSADGSAHVSNKNDKDKGVNVQVILRCRPLNEEEARLRTPMVISCNEQRREVLAMQNIANKQIDRTFVFDKVFGPTSQQKDLFNLSICPIVNEVLEGYNCTIFAYGQTGTGKTYTMEGGGKKAKNGEFPSDSGVIPRSVRQIFETLEAQCAEYSMKVTFLELYNEEITDLLTPDEPKFSDDKSKKPIALMEDGKGGVFVRGLEEEVVRSASEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKEVTPEGEEMIKIGKLNLVDLAGSENISRSGARDGRAREAGEINKSLLTLGRVINTLVEHSGHIPYRDSKLTRLLRDSLGGKTKTCIIATISPSIYCLEETLSTLDYAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDHLKQEVYAAREKNGIYIPRDRFLQEEAEKKAMAEKIERMEIELESKDKQLVELRDVYNSQQKMCAELSEKLNKTQKKMEDTENQLLDLEERFQQAKRTIKEKEYLISNLLQSEKSLVERAHGLQSDLENAAADISGLFSKIERKDKIEEGNRILVQRFQSQLTQQLEVLHKTVSSSVAQQENQLKEMEEDMQSFVSAKITATDELRGLVENLKAMYGSGIKVLDDLAGELDENSGSTFGKLKSQVLTHSSALEDCFKGFASEADNLLSELQSTLFKQEDKLNAFAQQQREGHLRTVETTRSISDTTMNFFDTLDIHVANLSKILEETQASQYQQLSELERKFEECAANEEKQLLEKVAEMLASSSSRKLSLVQTAVDTLRASAADRTSNLQKEMSNAQDFTSSVKEKWMVYLEETEKNYHQNTSNVESRRCGLEEGIKDCMENVKMGSRQWKDVQDALLSLWKGNVSSVETIVWNGMEANQLLRAKLSSAASVALGDVHNANNGLHSSINCSLKLDHDACTNIDSIIMPSRGDLKSLRNGHYHKIIEISNSAGKCLDEEYMVDEPSCLTPKKRSINLPSVASIEELRTPPIDELLKGFWDSKSAAKQINGDTKHLSAAFESHSQSFRDSRLPLTTLN

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0007018	Biological Process	microtubule-based movement
GO:0003777	Molecular Function	microtubule motor activity
GO:0008017	Molecular Function	microtubule binding
GO:0005524	Molecular Function	ATP binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.190
SRP064423	SRR2545915	Juvenile tuber	21.280
SRP108465	SRR5643513	five period of Gastrodia elata	58.450
	SRR5643514	five period of Gastrodia elata	59.830
	SRR5643515	five period of Gastrodia elata	59.730
	SRR5643524	five period of Gastrodia elata	59.930
	SRR5643525	five period of Gastrodia elata	58.730
	SRR5643528	five period of Gastrodia elata	53.590
	SRR5643658	five period of Gastrodia elata	64.330
	SRR5643659	five period of Gastrodia elata	47.570
	SRR5643660	five period of Gastrodia elata	42.540
	SRR5643661	five period of Gastrodia elata	46.110
	SRR5643662	five period of Gastrodia elata	39.670
	SRR5643663	five period of Gastrodia elata	46.410
	SRR5643664	five period of Gastrodia elata	39.690
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	39.700
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	45.840
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	41.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	28.130
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.600
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	19.570
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	24.790
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	25.030
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	41.760
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	31.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	56.020
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	56.020
SRP279888	Gastro	Gastrodia elata tuber	22.78
	Juven	Juvenile tuber	39.84
	Mother_Gastro	Mother tuber of Gastrodia elata	57.22
	Mother_Juven	Mother tuber of Juvenile	62.71