Detail information of GWHGAAEX000238/evm.TU.scaffold_0.411


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743757431|ref|XP_010921957.1|1.27E-85PREDICTED: protein PXR1 isoform X1 [Elaeis guineensis]
trEMBLtr|B9GNF3|B9GNF3_POPTR5.00E-80Uncharacterized protein {ECO:0000313|EMBL:EEE81030.2}
TAIRAT2G314104.00E-54Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142080854420809116+
Transcript Sequence

Network for GWHGAAEX000238

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03879.13Cgr1791814.10E-06
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms49.830
SRR2545915Juvenile tuber45.150
SRP108465SRR5643513five period of Gastrodia elata54.140
SRR5643514five period of Gastrodia elata41.420
SRR5643515five period of Gastrodia elata56.470
SRR5643524five period of Gastrodia elata48.660
SRR5643525five period of Gastrodia elata37.560
SRR5643528five period of Gastrodia elata37.790
SRR5643658five period of Gastrodia elata34.340
SRR5643659five period of Gastrodia elata117.170
SRR5643660five period of Gastrodia elata117.890
SRR5643661five period of Gastrodia elata113.260
SRR5643662five period of Gastrodia elata115.370
SRR5643663five period of Gastrodia elata99.640
SRR5643664five period of Gastrodia elata109.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_165.910
SRR6049655Rhizomagastrodiae_C368-T10_good_167.500
SRR6049656Rhizomagastrodiae_C368-T07_good_172.070
SRR6049657Rhizomagastrodiae_C368-T07_good_165.960
SRR6049658Rhizomagastrodiae_C368-T04_good_161.340
SRR6049659Rhizomagastrodiae_C368-T04_good_167.720
SRR6049660Rhizomagastrodiae_C368-T01_good_160.710
SRR6049661Rhizomagastrodiae_C368-T04_good_159.560
SRR6049662Rhizomagastrodiae_C368-T01_good_173.690
SRR6049663Rhizomagastrodiae_C368-T01_good_166.460
SRR6049664Rhizomagastrodiae_C368-T10_good_167.830
SRR6049665Rhizomagastrodiae_C368-T10_good_167.830
SRP279888GastroGastrodia elata tuber 109.44
JuvenJuvenile tuber87.72
Mother_GastroMother tuber of Gastrodia elata 42.12
Mother_JuvenMother tuber of Juvenile 52.84