Detail information of GWHGAAEX000247/evm.TU.scaffold_0.420


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|262194905|ref|YP_003266114.1|1.00E-93actin/actin family protein [Haliangium ochraceum DSM 14365]
KOGKOG06760Actin and related proteins
nrgi|510965286|gb|AGA17037.1|0actin [Dendrobium catenatum]
Swissprottr|A3C6D7|ACT2_ORYSJ0Actin-2
trEMBLtr|V9LXZ9|V9LXZ9_9ASPA0Actin {ECO:0000313|EMBL:AGA17037.1}
TAIRAT5G098100actin 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142101180421013479+
Transcript Sequence

Network for GWHGAAEX000247

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00022.18Actin53774.30E-148
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3101.120
SRR2545915Juvenile tuber2197.150
SRP108465SRR5643513five period of Gastrodia elata2021.920
SRR5643514five period of Gastrodia elata1878.130
SRR5643515five period of Gastrodia elata1847.550
SRR5643524five period of Gastrodia elata1768.580
SRR5643525five period of Gastrodia elata3425.060
SRR5643528five period of Gastrodia elata2507.870
SRR5643658five period of Gastrodia elata3263.090
SRR5643659five period of Gastrodia elata3125.030
SRR5643660five period of Gastrodia elata3895.370
SRR5643661five period of Gastrodia elata3442.290
SRR5643662five period of Gastrodia elata5820.590
SRR5643663five period of Gastrodia elata5085.730
SRR5643664five period of Gastrodia elata7393.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13113.750
SRR6049655Rhizomagastrodiae_C368-T10_good_12481.080
SRR6049656Rhizomagastrodiae_C368-T07_good_12631.870
SRR6049657Rhizomagastrodiae_C368-T07_good_13498.370
SRR6049658Rhizomagastrodiae_C368-T04_good_12755.090
SRR6049659Rhizomagastrodiae_C368-T04_good_13178.880
SRR6049660Rhizomagastrodiae_C368-T01_good_12736.740
SRR6049661Rhizomagastrodiae_C368-T04_good_12596.270
SRR6049662Rhizomagastrodiae_C368-T01_good_12323.860
SRR6049663Rhizomagastrodiae_C368-T01_good_12540.740
SRR6049664Rhizomagastrodiae_C368-T10_good_12170.220
SRR6049665Rhizomagastrodiae_C368-T10_good_12170.220
SRP279888GastroGastrodia elata tuber 2,672.41
JuvenJuvenile tuber2,017.49
Mother_GastroMother tuber of Gastrodia elata 1,201.50
Mother_JuvenMother tuber of Juvenile 1,233.10