Gene detail

Detail information of GWHGAAEX000248/evm.TU.scaffold_0.421

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743780987\|ref\|XP_010920704.1\|	9.90E-174	PREDICTED: uncharacterized protein LOC105044482 [Elaeis guineensis]
trEMBL	tr\|M1BVD9\|M1BVD9_SOLTU	4.00E-90	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400053727}
TAIR	AT5G01150	7.00E-52	Protein of unknown function (DUF674)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	21018091	21021856	-

Transcript Sequence
>GWHTAAEX000248 AAATTTTATTGAATAAGTTTTTTTTAAGTATCATATCAATAAATCTAAACAACAAAAATTTATTTAAAAGATCTCCAAACACCTAAAAAAATCACCCAATAAAAGTGATGTTACAGTCCCCAACTCAATAAAACTCTTAGAGGGATCCAACCTTTCTAACCATAATCGAATTTCTACCCGGCGGCTATGTCTTCTTCCATCGATTCCATCAGTAGTCCTCCCAAGATCACACTCAAGCTTCTCATCGACAAGGAGCGCAATCGAGTAGTCTTTGCCGAGACGGACAAAGATTTCGTCGATATCCTATTTAGCTTTCTTACTCTCCCGATTGGTTCCATAATTCGCCTCCTCGGCAAGAAATTAGGTGCCGGCTCCATAGATCGTCTCTACGAGAGCGTCGCCAAGCTCGAGGAATGTTGCTTTCAAACCCCCGCATGCCGGAAGATGCTCCTCAACCCCAAAAGCGTGGCGGAAGCCCGTTGTAAAGGACTTGCCCTCGAGCTCGACGAGGAATCTGAACCCTGGATCTACTATCGTTGCCTTTCTTCGAGGGCTTTTTGTAGTTGTGTGAGCTCGGTGTTCGGAGCTCGATGCGCCTGCGGTGGATCAACGGAAGCGCCTATTCTGGCGTTGGATTGGCGAGGATGCGAGGAATCGGGGAAGGGGTTTGTGAAGGAGGCGATCAATTTTATCATCAGCGACGATCTAATGGTACGCCCTGCTTCAGTTGGGACTAGCTTTGCTCTGATCAAGGAGCTTGGGATCGATGATGGCTACGTCCTTGAGAAGAAGACTGTGCATTTGGGCAGAGAAGAGATTTTGAATTTGCTCAAGAAAGCGCTCGTCTCAAAGTTCCCTCTGACAGATGTCTTCCTTCAGAAATCCGACACGATAGAGTATACTGAAAAAATATCAATGTCCAACATTATTCAAACAAGGGAAAAGCTGAAAATAAGCAGTGACAATAGCATGAGAATCCAAATGAAGCTTTTCTTAAGCAAAGACACTGACAAGGTAGTGTATGCCGAAGCAAGTGCAGAGGTGGTGAACCTTCTGTTCAGCTTCCTTACTTTTCCACTCGGTTCCATTATAAAACTTTTGGGGAAGAATTCTTTCTTGGGATCAATGGACAACTTATACAAGAGCGCTGAGCTATTGAGCAATTCACCAAACTACCTAATCTCAAATGAGTGCAAGGAGATGTTGTCATCTCCAAAGTTGGCTCCTTTCTTCGGCACTGACAAGAAGATGCTGCAAATTGAAGAAGCTTTACCTCGCACAATCAAGTCGTGTGCTTGCAAAACCTGCTTTTCTTTCTCTTCAGCTCTCCGATGCTCTCATGGACACAATGTGTCATCCTACAATCTGATGAACCCTAAGTTGCAAGACTCGGGCTTAGAAGTAGGAGGGGGATATATGAAAGGCATGGGATGGTATCTTATCACAGATGGGATGGAAGTGAGCCAGCTGTCACCAATCGCCAGTGTGCACATCATTAACAAATTAATGGTGCCTATCAATCGTCTAGAGGAGGTTACAGCTAGCATTGGAGAAGCAGAGGCATTGGATATGCTGAGAGCTTGTTTGATCTCTGGCGAGGTGCTAAGTGATGTATTTTCTCCATTTATACTGAAACTGCTACAGCAGAGTTGGCTGGGCTGCTTTCTTTGTAAATCAGATAGGTAACTCTTTTATAAATTGACATCTCATAATTCATATTTACTTAGATTCGCGTGAAAATTTTTATCTGAATATTCTGACTAAATGTAATTAGGAGGAAGAGAGAGTCTTTGAATTTGTTATGAGAAAAGTGAAATATATATTTAGTATATTGTCTATATACTCTTATTACGTG

Network for GWHGAAEX000248

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module6

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF05056.11	DUF674	12	456	2.60E-120

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	9.450
SRP064423	SRR2545915	Juvenile tuber	10.730
SRP108465	SRR5643513	five period of Gastrodia elata	3.770
	SRR5643514	five period of Gastrodia elata	3.870
	SRR5643515	five period of Gastrodia elata	2.960
	SRR5643524	five period of Gastrodia elata	3.350
	SRR5643525	five period of Gastrodia elata	3.790
	SRR5643528	five period of Gastrodia elata	4.200
	SRR5643658	five period of Gastrodia elata	3.450
	SRR5643659	five period of Gastrodia elata	1.720
	SRR5643660	five period of Gastrodia elata	3.320
	SRR5643661	five period of Gastrodia elata	1.710
	SRR5643662	five period of Gastrodia elata	1.260
	SRR5643663	five period of Gastrodia elata	1.550
	SRR5643664	five period of Gastrodia elata	1.700
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.700
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	4.330
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.160
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	7.100
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.170
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	10.270
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.390
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	10.000
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.130
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.840
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.230
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.230
SRP279888	Gastro	Gastrodia elata tuber	4.72
	Juven	Juvenile tuber	4.72
	Mother_Gastro	Mother tuber of Gastrodia elata	10.30
	Mother_Juven	Mother tuber of Juvenile	4.71