Gene detail

Detail information of GWHGAAEX000258/evm.TU.scaffold_0.431

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	21182996	21192289	+

Transcript Sequence
>GWHTAAEX000258 CGTGGATTTCCTCTTCGCCTTGAGGTAATGATATTGGCAATGTGTTTTCTTGTTGTTCAATGACAATTACCCCTTCTCTTTTTTCATTACACAGTATCAACTCTCAGGTCGACCTAATCACATTTTTAGGGATTTTCCTTTGAGATTTTTAACCGATCAAGCTGTTTGCAGCACTACATTTATAATTTTGATATTACTCGGTAAATATTTCCTTCGATTCCAACAAATTTCTTGAATAGTTACCGCTGTGAATTCCTTGCATAGTCGATAAATACATATTTTGTAGAGAACTGGATGTGTCTTTAGTTTCTCTCTTGAACTGATTTTAGTTCCTTCTTTGTTCTGATAGATATTTTAGCAATATAACTTAGCAAGTGTTCCAATGCTGTCCATGACATACAACCACCATGCAATTTCTTGTTGTAGGCAACCAATTTTTATAATTTATGTTAGTTTTTCGTTCTGATGCAATTAATCTGGAAGTTTTTTCTCATACATATAGAAACTGAATGGAGGAGCCATCGGCAGTTCATCTTTTATCTAATTCAGTTTCTGAAGATACTAGCTTTGAGTTGATTCACCATAGACTAGACTGCAAAACTTCTTGTGCGCAAGATCAACAGTTTACCTGTAATAATTTGTCAAAAAATGTTGAGAGCAAGGTTCAACAAATTTCTTGTTGTTCTATTGCAAAAAGTGACCAAGTTATTGGTGAGATAGTTGGTGCTGATGAAACCTGTTATCTTCAAAGCTCACATGCGCAACTTGCTGAGAATGATCCAACCTTTGAAGCAGATAAGATGCCTACTTCTGACGACGTCACTGCATTCAAGAAGCTCATTTATTCTGATGCTAGACTTCAGAAATGCTTGAACAAGTCTGCAACTTTTCCATCCTCTGAAGAAGAGTCTTTACCTTTAATTTATTCTGATATAACTGGGATATATGCTGAGAGAAATGGGGAATCACCAAGTACAAACGTAGTTGTTCAAAATTTATCTGCAGACCAGATTCCTACATTCAAACGCTCTACATCTCTTCCTGTGCATCCTATTGGTGCATGTCATTGTACCGCACTCGAGACAACAATTCCAATATTTTATTCTTTGGGTTTCCTTCTCATTAACGCCCATTTTCTTGCCGACTCTCGTCGAAATCATACATATGTTAATCCTTTTGCGAGTCTTGACGTGGCTGATTACAACAGAGAGTCTGGGCGCACCCATGCGCCAGGGCTTTGTCTAGCTCTTTCTTCAGCTGGCGTATGGGCATTTGGGCATGCTCAATGCTTGATTTTCTTGTCATCAACGGGAGCCTGGGTGCATCTAGGCACTCAATCCTTGGTTCCTGGTGACTTCACATGCTCTGATCCTTCCATGGCTGTTCTCGGCACTTGGGTGCGTCTAAGTACCCAGTCTGGTGCTTGA

Network for GWHGAAEX000258

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	17.740
SRP064423	SRR2545915	Juvenile tuber	17.810
SRP108465	SRR5643513	five period of Gastrodia elata	9.070
	SRR5643514	five period of Gastrodia elata	10.770
	SRR5643515	five period of Gastrodia elata	9.700
	SRR5643524	five period of Gastrodia elata	7.900
	SRR5643525	five period of Gastrodia elata	14.490
	SRR5643528	five period of Gastrodia elata	13.970
	SRR5643658	five period of Gastrodia elata	16.480
	SRR5643659	five period of Gastrodia elata	11.740
	SRR5643660	five period of Gastrodia elata	9.370
	SRR5643661	five period of Gastrodia elata	10.590
	SRR5643662	five period of Gastrodia elata	10.870
	SRR5643663	five period of Gastrodia elata	11.530
	SRR5643664	five period of Gastrodia elata	10.000
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	11.760
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.350
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	10.020
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	11.970
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	12.760
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	15.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	13.030
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	14.920
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.990
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	14.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	11.850
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	11.850
SRP279888	Gastro	Gastrodia elata tuber	11.07
	Juven	Juvenile tuber	12.68
	Mother_Gastro	Mother tuber of Gastrodia elata	6.96
	Mother_Juven	Mother tuber of Juvenile	8.98