Detail information of GWHGAAEX000271/evm.TU.scaffold_0.444


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|385332461|ref|YP_005886412.1|1.00E-08protein-tyrosine phosphatase-like protein [Marinobacter adhaerens HP15]
KOGKOG31871.00E-56Protein tyrosine phosphatase-like protein PTPLA (contains Pro instead of catalytic Arg)
nrgi|672122391|ref|XP_008784525.1|1.26E-122PREDICTED: very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2A [Phoenix dactylifera]
Swissprottr|Q8VZB2|PAS2_ARATH1.00E-111Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2
trEMBLtr|V5M181|V5M181_GOSHI6.00E-1203-hydroxyacyl-CoA dehydratase PASTICCINO 2 {ECO:0000313|EMBL:AHA62438.1}
TAIRAT5G104801.00E-56Protein-tyrosine phosphatase-like, PTPLA

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142134256021353616-
Transcript Sequence

Network for GWHGAAEX000271

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04387.13PTPLA552179.50E-60
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10703HACD, PHS1, PAS2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Biosynthesis of unsaturated fatty acidsmap01040

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms46.540
SRR2545915Juvenile tuber76.850
SRP108465SRR5643513five period of Gastrodia elata33.490
SRR5643514five period of Gastrodia elata33.440
SRR5643515five period of Gastrodia elata31.370
SRR5643524five period of Gastrodia elata31.380
SRR5643525five period of Gastrodia elata40.400
SRR5643528five period of Gastrodia elata36.700
SRR5643658five period of Gastrodia elata36.820
SRR5643659five period of Gastrodia elata25.170
SRR5643660five period of Gastrodia elata25.390
SRR5643661five period of Gastrodia elata26.300
SRR5643662five period of Gastrodia elata26.920
SRR5643663five period of Gastrodia elata28.610
SRR5643664five period of Gastrodia elata23.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_142.270
SRR6049655Rhizomagastrodiae_C368-T10_good_161.830
SRR6049656Rhizomagastrodiae_C368-T07_good_150.370
SRR6049657Rhizomagastrodiae_C368-T07_good_135.310
SRR6049658Rhizomagastrodiae_C368-T04_good_146.700
SRR6049659Rhizomagastrodiae_C368-T04_good_138.230
SRR6049660Rhizomagastrodiae_C368-T01_good_138.720
SRR6049661Rhizomagastrodiae_C368-T04_good_143.920
SRR6049662Rhizomagastrodiae_C368-T01_good_169.460
SRR6049663Rhizomagastrodiae_C368-T01_good_149.200
SRR6049664Rhizomagastrodiae_C368-T10_good_151.660
SRR6049665Rhizomagastrodiae_C368-T10_good_151.660
SRP279888GastroGastrodia elata tuber 43.80
JuvenJuvenile tuber32.30
Mother_GastroMother tuber of Gastrodia elata 31.69
Mother_JuvenMother tuber of Juvenile 25.00