Detail information of GWHGAAEX000276/evm.TU.scaffold_0.450


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG34528.00E-5460S ribosomal protein L36
nrgi|695065500|ref|XP_009421339.1|4.22E-65PREDICTED: 60S ribosomal protein L36-3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9LZ57|RL363_ARATH2.00E-5460S ribosomal protein L36-3
trEMBLtr|M0RHZ1|M0RHZ1_MUSAM2.00E-6560S ribosomal protein L36 {ECO:0000256|RuleBase:RU000665}
TAIRAT5G024508.00E-54Ribosomal protein L36e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142141939021425257-
Transcript Sequence

Network for GWHGAAEX000276

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01158.17Ribosomal_L36e81016.50E-42
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02920RP-L36e, RPL36 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.840
SRR2545915Juvenile tuber45.730
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.000
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.000
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_112.480
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.610
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.600
SRR6049665Rhizomagastrodiae_C368-T10_good_10.600
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 0.00
Mother_JuvenMother tuber of Juvenile 0.00