Detail information of GWHGAAEX000278/evm.TU.scaffold_0.452


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG16392.00E-138Steroid reductase required for elongation of the very long chain fatty acids
nrgi|301349393|gb|ADK74340.1|6.66E-169trans-2-enoyl-CoA reductase [Phalaenopsis amabilis]
Swissprottr|Q9M2U2|ECR_ARATH7.00E-139Very-long-chain enoyl-CoA reductase
trEMBLtr|E2ITW8|E2ITW8_PHAAB2.00E-169Trans-2-enoyl-CoA reductase {ECO:0000313|EMBL:ADK74340.1}
TAIRAT3G553602.00E-1383-oxo-5-alpha-steroid 4-dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142146493621467789-
Transcript Sequence

Network for GWHGAAEX000278

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02544.15Steroid_dh1492988.30E-25
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K10258TER, TSC13, CER10 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid elongationmap00062
Biosynthesis of unsaturated fatty acidsmap01040

Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process
GO:0016627Molecular Functionoxidoreductase activity, acting on the CH-CH group of donors

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms128.510
SRR2545915Juvenile tuber25.170
SRP108465SRR5643513five period of Gastrodia elata2.310
SRR5643514five period of Gastrodia elata3.120
SRR5643515five period of Gastrodia elata19.280
SRR5643524five period of Gastrodia elata37.970
SRR5643525five period of Gastrodia elata11.740
SRR5643528five period of Gastrodia elata808.110
SRR5643658five period of Gastrodia elata61.970
SRR5643659five period of Gastrodia elata39.300
SRR5643660five period of Gastrodia elata11.690
SRR5643661five period of Gastrodia elata20.800
SRR5643662five period of Gastrodia elata13.490
SRR5643663five period of Gastrodia elata5.650
SRR5643664five period of Gastrodia elata8.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.510
SRR6049655Rhizomagastrodiae_C368-T10_good_11.290
SRR6049656Rhizomagastrodiae_C368-T07_good_11.290
SRR6049657Rhizomagastrodiae_C368-T07_good_10.770
SRR6049658Rhizomagastrodiae_C368-T04_good_12.650
SRR6049659Rhizomagastrodiae_C368-T04_good_12.120
SRR6049660Rhizomagastrodiae_C368-T01_good_113.850
SRR6049661Rhizomagastrodiae_C368-T04_good_14.970
SRR6049662Rhizomagastrodiae_C368-T01_good_14.290
SRR6049663Rhizomagastrodiae_C368-T01_good_18.130
SRR6049664Rhizomagastrodiae_C368-T10_good_18.640
SRR6049665Rhizomagastrodiae_C368-T10_good_18.640
SRP279888GastroGastrodia elata tuber 1.88
JuvenJuvenile tuber2.22
Mother_GastroMother tuber of Gastrodia elata 307.83
Mother_JuvenMother tuber of Juvenile 98.79