Detail information of GWHGAAEX000289/evm.TU.scaffold_0.461


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|593427950|ref|XP_007140517.1|6.63E-53hypothetical protein PHAVU_008G119400g [Phaseolus vulgaris]
Swissprottr|Q9FHR7|WRK49_ARATH3.00E-39Probable WRKY transcription factor 49
trEMBLtr|V7B7R4|V7B7R4_PHAVU2.00E-53Uncharacterized protein {ECO:0000313|EMBL:ESW12511.1}
TAIRAT5G432901.00E-38WRKY DNA-binding protein 49

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142181048121814503-
Transcript Sequence

Network for GWHGAAEX000289

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY1251832.90E-22
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.000
SRR2545915Juvenile tuber8.510
SRP108465SRR5643513five period of Gastrodia elata8.160
SRR5643514five period of Gastrodia elata5.150
SRR5643515five period of Gastrodia elata12.140
SRR5643524five period of Gastrodia elata7.550
SRR5643525five period of Gastrodia elata3.370
SRR5643528five period of Gastrodia elata0.680
SRR5643658five period of Gastrodia elata0.910
SRR5643659five period of Gastrodia elata4.830
SRR5643660five period of Gastrodia elata1.200
SRR5643661five period of Gastrodia elata2.640
SRR5643662five period of Gastrodia elata7.070
SRR5643663five period of Gastrodia elata3.720
SRR5643664five period of Gastrodia elata0.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.070
SRR6049655Rhizomagastrodiae_C368-T10_good_14.990
SRR6049656Rhizomagastrodiae_C368-T07_good_13.590
SRR6049657Rhizomagastrodiae_C368-T07_good_13.680
SRR6049658Rhizomagastrodiae_C368-T04_good_13.120
SRR6049659Rhizomagastrodiae_C368-T04_good_11.580
SRR6049660Rhizomagastrodiae_C368-T01_good_12.780
SRR6049661Rhizomagastrodiae_C368-T04_good_16.970
SRR6049662Rhizomagastrodiae_C368-T01_good_15.690
SRR6049663Rhizomagastrodiae_C368-T01_good_13.030
SRR6049664Rhizomagastrodiae_C368-T10_good_13.630
SRR6049665Rhizomagastrodiae_C368-T10_good_13.630
SRP279888GastroGastrodia elata tuber 5.28
JuvenJuvenile tuber1.45
Mother_GastroMother tuber of Gastrodia elata 0.41
Mother_JuvenMother tuber of Juvenile 1.48