Detail information of GWHGAAEX000298/evm.TU.scaffold_0.474


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|586643411|ref|XP_006826759.1|8.36E-62hypothetical protein AMTR_s00136p00074490 [Amborella trichopoda]
Swissprottr|Q9LI74|CHUP1_ARATH4.00E-43Protein CHUP1, chloroplastic
trEMBLtr|W1NEW5|W1NEW5_AMBTC3.00E-62Uncharacterized protein {ECO:0000313|EMBL:ERM93996.1}
TAIRAT1G520803.00E-57actin binding protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142197571921977916-
Transcript Sequence

Network for GWHGAAEX000298

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms48.630
SRR2545915Juvenile tuber32.990
SRP108465SRR5643513five period of Gastrodia elata34.970
SRR5643514five period of Gastrodia elata24.950
SRR5643515five period of Gastrodia elata31.290
SRR5643524five period of Gastrodia elata25.900
SRR5643525five period of Gastrodia elata42.570
SRR5643528five period of Gastrodia elata34.060
SRR5643658five period of Gastrodia elata37.650
SRR5643659five period of Gastrodia elata31.460
SRR5643660five period of Gastrodia elata32.560
SRR5643661five period of Gastrodia elata35.060
SRR5643662five period of Gastrodia elata36.860
SRR5643663five period of Gastrodia elata30.350
SRR5643664five period of Gastrodia elata41.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.260
SRR6049655Rhizomagastrodiae_C368-T10_good_125.140
SRR6049656Rhizomagastrodiae_C368-T07_good_128.910
SRR6049657Rhizomagastrodiae_C368-T07_good_140.500
SRR6049658Rhizomagastrodiae_C368-T04_good_131.730
SRR6049659Rhizomagastrodiae_C368-T04_good_138.460
SRR6049660Rhizomagastrodiae_C368-T01_good_134.380
SRR6049661Rhizomagastrodiae_C368-T04_good_136.110
SRR6049662Rhizomagastrodiae_C368-T01_good_122.080
SRR6049663Rhizomagastrodiae_C368-T01_good_126.090
SRR6049664Rhizomagastrodiae_C368-T10_good_126.200
SRR6049665Rhizomagastrodiae_C368-T10_good_126.200
SRP279888GastroGastrodia elata tuber 50.29
JuvenJuvenile tuber50.05
Mother_GastroMother tuber of Gastrodia elata 53.85
Mother_JuvenMother tuber of Juvenile 60.09