Detail information of GWHGAAEX000300/evm.TU.scaffold_0.480


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG20690Golgi transport complex subunit
nrgi|743797645|ref|XP_010925036.1|0PREDICTED: conserved oligomeric Golgi complex subunit 8-like [Elaeis guineensis]
trEMBLtr|J3NDX8|J3NDX8_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB12G21860.1}
TAIRAT5G119800conserved oligomeric Golgi complex component-related / COG complex component-related

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142225771722294574+
Transcript Sequence

Network for GWHGAAEX000300

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04124.11Dor1333669.80E-130
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0017119Cellular ComponentGolgi transport complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.480
SRR2545915Juvenile tuber18.030
SRP108465SRR5643513five period of Gastrodia elata23.090
SRR5643514five period of Gastrodia elata26.930
SRR5643515five period of Gastrodia elata25.340
SRR5643524five period of Gastrodia elata23.760
SRR5643525five period of Gastrodia elata19.460
SRR5643528five period of Gastrodia elata19.390
SRR5643658five period of Gastrodia elata22.310
SRR5643659five period of Gastrodia elata22.290
SRR5643660five period of Gastrodia elata22.440
SRR5643661five period of Gastrodia elata22.560
SRR5643662five period of Gastrodia elata21.550
SRR5643663five period of Gastrodia elata22.190
SRR5643664five period of Gastrodia elata24.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_119.550
SRR6049655Rhizomagastrodiae_C368-T10_good_123.140
SRR6049656Rhizomagastrodiae_C368-T07_good_119.410
SRR6049657Rhizomagastrodiae_C368-T07_good_116.040
SRR6049658Rhizomagastrodiae_C368-T04_good_110.720
SRR6049659Rhizomagastrodiae_C368-T04_good_111.840
SRR6049660Rhizomagastrodiae_C368-T01_good_113.270
SRR6049661Rhizomagastrodiae_C368-T04_good_112.470
SRR6049662Rhizomagastrodiae_C368-T01_good_119.250
SRR6049663Rhizomagastrodiae_C368-T01_good_115.020
SRR6049664Rhizomagastrodiae_C368-T10_good_124.580
SRR6049665Rhizomagastrodiae_C368-T10_good_124.580
SRP279888GastroGastrodia elata tuber 19.10
JuvenJuvenile tuber27.04
Mother_GastroMother tuber of Gastrodia elata 18.73
Mother_JuvenMother tuber of Juvenile 23.12