Detail information of GWHGAAEX000311/evm.TU.scaffold_0.497


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|430742193|ref|YP_007201322.1|3.00E-102membrane protease subunit, stomatin/prohibitin [Singulisphaera acidiphila DSM 18658]
KOGKOG26200Prohibitins and stomatins of the PID superfamily
nrgi|514746035|ref|XP_004961021.1|0PREDICTED: hypersensitive-induced response protein 1-like isoform X1 [Setaria italica]
Swissprottr|Q9FM19|HIR1_ARATH0Hypersensitive-induced response protein 1
trEMBLtr|K3Z8J9|K3Z8J9_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si022869m}
TAIRAT5G627400SPFH/Band 7/PHB domain-containing membrane-associated protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142290608322912616+
Transcript Sequence

Network for GWHGAAEX000311

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01145.24Band_791825.80E-29
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms197.400
SRR2545915Juvenile tuber88.120
SRP108465SRR5643513five period of Gastrodia elata126.720
SRR5643514five period of Gastrodia elata125.410
SRR5643515five period of Gastrodia elata119.710
SRR5643524five period of Gastrodia elata65.660
SRR5643525five period of Gastrodia elata212.210
SRR5643528five period of Gastrodia elata147.520
SRR5643658five period of Gastrodia elata266.170
SRR5643659five period of Gastrodia elata57.220
SRR5643660five period of Gastrodia elata73.160
SRR5643661five period of Gastrodia elata59.350
SRR5643662five period of Gastrodia elata63.050
SRR5643663five period of Gastrodia elata62.450
SRR5643664five period of Gastrodia elata77.570
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1136.890
SRR6049655Rhizomagastrodiae_C368-T10_good_1164.830
SRR6049656Rhizomagastrodiae_C368-T07_good_1138.390
SRR6049657Rhizomagastrodiae_C368-T07_good_1172.110
SRR6049658Rhizomagastrodiae_C368-T04_good_1212.950
SRR6049659Rhizomagastrodiae_C368-T04_good_1252.090
SRR6049660Rhizomagastrodiae_C368-T01_good_1159.830
SRR6049661Rhizomagastrodiae_C368-T04_good_1176.040
SRR6049662Rhizomagastrodiae_C368-T01_good_161.780
SRR6049663Rhizomagastrodiae_C368-T01_good_195.030
SRR6049664Rhizomagastrodiae_C368-T10_good_1141.430
SRR6049665Rhizomagastrodiae_C368-T10_good_1141.430
SRP279888GastroGastrodia elata tuber 85.88
JuvenJuvenile tuber83.68
Mother_GastroMother tuber of Gastrodia elata 324.11
Mother_JuvenMother tuber of Juvenile 171.14