Detail information of GWHGAAEX000312/evm.TU.scaffold_0.499


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|430742193|ref|YP_007201322.1|2.00E-100membrane protease subunit, stomatin/prohibitin [Singulisphaera acidiphila DSM 18658]
KOGKOG26200Prohibitins and stomatins of the PID superfamily
nrgi|743755084|ref|XP_010932564.1|0PREDICTED: hypersensitive-induced response protein 1 [Elaeis guineensis]
Swissprottr|Q9FM19|HIR1_ARATH0Hypersensitive-induced response protein 1
trEMBLtr|J3MAB6|J3MAB6_ORYBR0Uncharacterized protein {ECO:0000313|EnsemblPlants:OB05G35400.1}
TAIRAT5G627400SPFH/Band 7/PHB domain-containing membrane-associated protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142301965523029655+
Transcript Sequence

Network for GWHGAAEX000312

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01145.24Band_791827.10E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms235.700
SRR2545915Juvenile tuber101.040
SRP108465SRR5643513five period of Gastrodia elata218.730
SRR5643514five period of Gastrodia elata155.240
SRR5643515five period of Gastrodia elata132.360
SRR5643524five period of Gastrodia elata147.050
SRR5643525five period of Gastrodia elata604.620
SRR5643528five period of Gastrodia elata383.040
SRR5643658five period of Gastrodia elata483.340
SRR5643659five period of Gastrodia elata60.080
SRR5643660five period of Gastrodia elata83.420
SRR5643661five period of Gastrodia elata74.990
SRR5643662five period of Gastrodia elata105.910
SRR5643663five period of Gastrodia elata74.810
SRR5643664five period of Gastrodia elata199.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1188.640
SRR6049655Rhizomagastrodiae_C368-T10_good_1128.430
SRR6049656Rhizomagastrodiae_C368-T07_good_1159.800
SRR6049657Rhizomagastrodiae_C368-T07_good_1235.880
SRR6049658Rhizomagastrodiae_C368-T04_good_1249.100
SRR6049659Rhizomagastrodiae_C368-T04_good_1305.250
SRR6049660Rhizomagastrodiae_C368-T01_good_1184.980
SRR6049661Rhizomagastrodiae_C368-T04_good_1211.890
SRR6049662Rhizomagastrodiae_C368-T01_good_1106.520
SRR6049663Rhizomagastrodiae_C368-T01_good_1124.310
SRR6049664Rhizomagastrodiae_C368-T10_good_1180.430
SRR6049665Rhizomagastrodiae_C368-T10_good_1180.430
SRP279888GastroGastrodia elata tuber 169.37
JuvenJuvenile tuber258.24
Mother_GastroMother tuber of Gastrodia elata 692.24
Mother_JuvenMother tuber of Juvenile 801.58