Gene detail

Detail information of GWHGAAEX000314/evm.TU.scaffold_0.503

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|426400694\|ref\|YP_007019666.1\|	3.00E-76	hypothetical protein A1OE_196 [Candidatus Endolissoclinum faulkneri L2]
KOG	KOG2901	0	Uncharacterized conserved protein
nr	gi\|695048937\|ref\|XP_009412389.1\|	0	PREDICTED: NADH dehydrogenase [ubiquinone] complex I, assembly factor 7 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0TMG3\|M0TMG3_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr8P04100_001}
TAIR	AT3G28700	0	Protein of unknown function (DUF185)

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	23091377	23122446	+

Transcript Sequence
>GWHTAAEX000314 CAGATCATTTTCACTAGGCTACTGCTGATTTGAAACTTGCAATTGCATCTGAAGAGCATTATAAAGTTTCGTGGAGGTCCCATTTCGATTGCTGAGTACATGGAAGAAGTCTTGACAAATCCTAATTATGGGTTCTACATCAACAGAAATGTCTTTGGAGCTTGTGGTGATTTCATAACTTCTCCTGAAGTTAGCCAAATGTTTGGTGAGATGGTTGGCGTGTGGACAATGTGTTTGTGGGAGCAGCTGGGGCGACCTGCCAAAGTAAATCTTGTTGAACTTGGTCCAGGGCGAGGGACACTCATGGCTGACCTTCTCCGTGGCTCTTCAAAATTTCGTGATTTTTCAAAATCAGTTGATATTCACTTCGTTGAGTGCAGTCCAACACTGCAGAAGCTTCAGTATGATACCTTGCAATGCATTGATGACACCATATCTGGAGATAAGAATGCTGCAAGAACAACAACCACATTGACTGGAGCTCCTATTTTTTGGCATGCTGATTTGGATGGGATTTCATTAGGATTACCAACAATTATCATTGCACATGAATTCTACGATGCTCTGCCAATCTATCAATTTCAGAAAACTGTTCATGGATGGCGCGAAAAGATGATAGACATATCAGACGATTCTTCATTCCAATTTGTTTTATCACCACAACCCACTCCTGCATCTCAGTTGTTTCTGAGGAGACGCTGTCATTGGGCTGACAAAGAAGAAGTTGCACAGCTCGAACAAATTGAAGTGTCTCCTAGAGCGTTGGAGTTGACTCATCAAATTGCAAAGAGAATAAGCATTGATGGTGGCGGAGCTCTCATCATAGACTACGGGAAAAATCAACTTATTTCAGACAGTTTACAGGCGATTCAGAGGCACAAATTCGTTCACGTTCTTGACAACCCTGGTTCAGCTGATCTCAGTGCATATGTTGATTTTGCGGCTATTCGCCGGTCTGCCGAAGAGGCATCAGAAAACATATCTGTTTATGGCCCTATCACTCAGTCCCAGCTTTTGGGGTTCCTTGGCATTAACTTTCGGTTGGAGGCCCTATTGCAGGGCTGCAACGAAGAACAAGGGGAGTCCCTCAAGGCAGGGTACTGGCGGCTTGTGGGAGATGGTGAGGCACCTTTCTGGGAGGGTCCTAAAGAGAAAACGCCCATTGGTATGGGAGTTCGGTATCTTGCTATGGCAATTGTGAACAAGAGTCAAGGAGTCCCAGTGCCTTTCCAGTAAGTTATTAATTTGTTTTGTTTGAATTTATTATTATTCTGGAGAATAAAAGATTTATTCAGAGTGGTGGTTTAATTCGAACAATTTTAGATAGAGTTCTTTTGAAGAGACTGTAGTAAAGGAAATGCCAAATTCTTGGATTGTTGGGTTGCAACCAAAATGGATGTTGTTAGACCTAAGAGAATCCTTAAAGTCATTAATGGATGACAAGTGGCACATGTATATCACATATAGGGCTGGAAATGTCTGAGTTCGATTGAGTTTAAATTTGAAGTTGAGTAAGTCGATTTGTATTGAATCGAAATCGATTCAAACTTGCAATGAGTTCAAATCTTGTTGGCTTGAGGTTGAAATTTAACGAGTTTGAGTTGATTCGGCTTGAATCGAAATTTATCTTGGAATAAGGTCAAGCATTGTCGGCTTGATTTGAATTTTATTTGAAATTTAATGACTTTGAG

Network for GWHGAAEX000314

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02636.16	Methyltransf_28	38	300	1.30E-67

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K18164	NDUFAF7	Thermogenesis	map04714

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	6.370
SRP064423	SRR2545915	Juvenile tuber	5.140
SRP108465	SRR5643513	five period of Gastrodia elata	5.630
	SRR5643514	five period of Gastrodia elata	5.550
	SRR5643515	five period of Gastrodia elata	5.470
	SRR5643524	five period of Gastrodia elata	5.850
	SRR5643525	five period of Gastrodia elata	4.040
	SRR5643528	five period of Gastrodia elata	4.090
	SRR5643658	five period of Gastrodia elata	3.770
	SRR5643659	five period of Gastrodia elata	8.580
	SRR5643660	five period of Gastrodia elata	8.320
	SRR5643661	five period of Gastrodia elata	8.480
	SRR5643662	five period of Gastrodia elata	6.910
	SRR5643663	five period of Gastrodia elata	8.710
	SRR5643664	five period of Gastrodia elata	6.190
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.020
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	2.870
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.980
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.770
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.850
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.210
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.950
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.310
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.680
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.070
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.310
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.310
SRP279888	Gastro	Gastrodia elata tuber	7.41
	Juven	Juvenile tuber	6.11
	Mother_Gastro	Mother tuber of Gastrodia elata	4.18
	Mother_Juven	Mother tuber of Juvenile	3.60