Detail information of GWHGAAEX000315/evm.TU.scaffold_0.505


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|147919638|ref|YP_686619.1|1.00E-59hypothetical protein RCIX2172 [Methanocella arvoryzae MRE50]
nrgi|225440733|ref|XP_002275414.1|4.65E-120PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Vitis vinifera]
Swissprottr|Q8GW29|LOG7_ARATH2.00E-115Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7
trEMBLtr|A5B1P2|A5B1P2_VITVI2.00E-120Putative uncharacterized protein {ECO:0000313|EMBL:CAN67407.1}
TAIRAT5G063006.00E-115Putative lysine decarboxylase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000142322195623225799-
Transcript Sequence

Network for GWHGAAEX000315

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03641.13Lysine_decarbox681985.00E-45
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.790
SRR2545915Juvenile tuber4.950
SRP108465SRR5643513five period of Gastrodia elata23.630
SRR5643514five period of Gastrodia elata15.210
SRR5643515five period of Gastrodia elata35.650
SRR5643524five period of Gastrodia elata19.670
SRR5643525five period of Gastrodia elata55.370
SRR5643528five period of Gastrodia elata66.430
SRR5643658five period of Gastrodia elata107.800
SRR5643659five period of Gastrodia elata10.490
SRR5643660five period of Gastrodia elata8.980
SRR5643661five period of Gastrodia elata6.690
SRR5643662five period of Gastrodia elata19.360
SRR5643663five period of Gastrodia elata11.220
SRR5643664five period of Gastrodia elata14.130
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.870
SRR6049655Rhizomagastrodiae_C368-T10_good_122.500
SRR6049656Rhizomagastrodiae_C368-T07_good_114.920
SRR6049657Rhizomagastrodiae_C368-T07_good_122.690
SRR6049658Rhizomagastrodiae_C368-T04_good_126.980
SRR6049659Rhizomagastrodiae_C368-T04_good_138.620
SRR6049660Rhizomagastrodiae_C368-T01_good_121.180
SRR6049661Rhizomagastrodiae_C368-T04_good_124.000
SRR6049662Rhizomagastrodiae_C368-T01_good_19.240
SRR6049663Rhizomagastrodiae_C368-T01_good_115.130
SRR6049664Rhizomagastrodiae_C368-T10_good_113.810
SRR6049665Rhizomagastrodiae_C368-T10_good_113.810
SRP279888GastroGastrodia elata tuber 20.00
JuvenJuvenile tuber4.04
Mother_GastroMother tuber of Gastrodia elata 254.74
Mother_JuvenMother tuber of Juvenile 331.60