Detail information of GWHGAAEX000316/evm.TU.scaffold_0.508
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|374983854|ref|YP_004959349.1| | 8.00E-17 | serine/threonine protein kinase [Streptomyces bingchenggensis BCW-1] |
| KOG | KOG0671 | 0 | LAMMER dual specificity kinases |
| nr | gi|743797859|ref|XP_010925087.1| | 0 | PREDICTED: serine/threonine-protein kinase AFC3 isoform X3 [Elaeis guineensis] |
| Swissprot | tr|P51568|AFC3_ARATH | 0 | Serine/threonine-protein kinase AFC3 |
| trEMBL | tr|M0TMF6|M0TMF6_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P04030_001} |
| TAIR | AT4G32660 | 0 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 23428592 | 23444885 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000316
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 61 | 386 | 1.40E-50 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_CLK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 9.720 |
| SRR2545915 | Juvenile tuber | 8.620 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.540 |
| SRR5643514 | five period of Gastrodia elata | 13.700 | |
| SRR5643515 | five period of Gastrodia elata | 13.070 | |
| SRR5643524 | five period of Gastrodia elata | 12.720 | |
| SRR5643525 | five period of Gastrodia elata | 13.020 | |
| SRR5643528 | five period of Gastrodia elata | 13.400 | |
| SRR5643658 | five period of Gastrodia elata | 11.780 | |
| SRR5643659 | five period of Gastrodia elata | 10.840 | |
| SRR5643660 | five period of Gastrodia elata | 10.820 | |
| SRR5643661 | five period of Gastrodia elata | 10.430 | |
| SRR5643662 | five period of Gastrodia elata | 9.420 | |
| SRR5643663 | five period of Gastrodia elata | 10.940 | |
| SRR5643664 | five period of Gastrodia elata | 11.050 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.360 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 10.700 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 12.880 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 12.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 11.130 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 12.100 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 13.000 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 11.660 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 10.550 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 13.200 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.530 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.530 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 13.76 |
| Juven | Juvenile tuber | 10.28 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 19.71 | |
| Mother_Juven | Mother tuber of Juvenile | 12.89 |