Detail information of GWHGAAEX000321/evm.TU.scaffold_0.516
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG0752 | 7.00E-135 | Mitochondrial solute carrier protein |
| nr | gi|672192999|ref|XP_008775917.1| | 2.22E-175 | PREDICTED: mitochondrial substrate carrier family protein P [Phoenix dactylifera] |
| Swissprot | tr|O04619|ADNT1_ARATH | 1.00E-58 | Mitochondrial adenine nucleotide transporter ADNT1 |
| trEMBL | tr|M0TTS9|M0TTS9_MUSAM | 1.00E-164 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P26260_001} |
| TAIR | AT1G14560 | 7.00E-135 | Mitochondrial substrate carrier family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000014 | 23817106 | 23819684 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX000321
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00153.26 | Mito_carr | 27 | 113 | 4.10E-21 |
| PF00153.26 | Mito_carr | 122 | 230 | 3.60E-22 |
| PF00153.26 | Mito_carr | 238 | 327 | 8.70E-18 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055085 | Biological Process | transmembrane transport |
| GO:0022857 | Molecular Function | transmembrane transporter activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 52.770 |
| SRR2545915 | Juvenile tuber | 29.840 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 24.670 |
| SRR5643514 | five period of Gastrodia elata | 14.540 | |
| SRR5643515 | five period of Gastrodia elata | 15.700 | |
| SRR5643524 | five period of Gastrodia elata | 15.800 | |
| SRR5643525 | five period of Gastrodia elata | 21.850 | |
| SRR5643528 | five period of Gastrodia elata | 24.500 | |
| SRR5643658 | five period of Gastrodia elata | 23.400 | |
| SRR5643659 | five period of Gastrodia elata | 22.770 | |
| SRR5643660 | five period of Gastrodia elata | 32.210 | |
| SRR5643661 | five period of Gastrodia elata | 23.600 | |
| SRR5643662 | five period of Gastrodia elata | 29.630 | |
| SRR5643663 | five period of Gastrodia elata | 24.520 | |
| SRR5643664 | five period of Gastrodia elata | 30.630 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 47.520 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 29.780 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 35.330 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 60.300 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 62.560 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 77.480 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 56.310 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 50.600 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 30.360 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 38.580 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 31.580 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 31.580 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 27.26 |
| Juven | Juvenile tuber | 44.83 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 43.34 | |
| Mother_Juven | Mother tuber of Juvenile | 39.64 |