Gene detail

Detail information of GWHGAAEX000323/evm.TU.scaffold_0.518

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|317133044\|ref\|YP_004092358.1\|	5.00E-23	serine/threonine protein kinase with PASTA sensor(s) [Ethanoligenens harbinense YUAN-3]
KOG	KOG1187	2.00E-138	Serine/threonine protein kinase
nr	gi\|743797476\|ref\|XP_010924992.1\|	0	PREDICTED: receptor-like serine/threonine-protein kinase ALE2 [Elaeis guineensis]
Swissprot	tr\|Q8RWW0\|ALE2_ARATH	0	Receptor-like serine/threonine-protein kinase ALE2 (Precursor)
trEMBL	tr\|A0A067KCH9\|A0A067KCH9_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP33837.1}
TAIR	AT2G20300	2.00E-138	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000014	23868574	23888296	+

Transcript Sequence
>GWHTAAEX000323 CCTCACTCAATGTTTCCCTCTGAAATCTCTGCATCAGGCGAAACATTTTACCATGGGAAATGAAAGTAAAGAAGAAGCCTTTTGCTGATTGGTTCGTGGTAACGTGGTCTCTCGCATTGGCCTGCACTTCGTTTTTTTTTTGTCTACAATGGCTTCCTTGCTTTGAATTCAGCTTTACCGACACTGGTTTTGTCTCCATTAGAGCTCCTCGTCTCTTGCTTCATCCGTGTCATTTGGTTGGTTTGATCCGTCGAACATTCTCTCTCTGTCCCTCTCTATCTCTCTATATTCTATCTCTCTGCGAAATTGCCTTCTACTCCACCCTAGCTTGTGGAAAGAACGAAGCGATCCAATGGGGCAGTGGTGGAGACTCGTGTCTCGGGCTATCGTCCTCGGACTTCTTTTTGTTCCGGTGATTCATGGATTTAGAGGCCCCCAATTTTTTCAATCTGATACTCTTAAGATGCTCTTATTTCAACCTCCAGCTGTAAGAGAGCTTTATGATCACACAACAGGAGCTGCTGTTCCTCCTCTCCAACAAACATATTATGAGAGGTCTAAAAATGTTGCCTTTTCTCCGTATCATCATTTTCATCATCTAGCTGACCCTCCAGTTGGTCTTGTATTTACTCCCTCTCCTTCACATTCAAAAGTAGCAATTCCTCCTGAAAGACAAAGGAATCATGGTGTACCTTACTATAGCAAAGGACCAACCAGTTCTGCTGCTGCTAAAACTTTTAGCTCTATTAATGGAAAACCATGGTCATCATCAGCACAACCTTTTCTAGAAATACCACCTCCACCTCCTAATGTTGGGTGTATGTTGCTAACCTGTGCAAATCCTCTAACCTATAGTCCTCCTGGATCTCCATGTGCCTGTGTTTTGCCAATTAGAGTGGGGCTACAACTAGATGTTGCGCCGTACACATTCTTCCCCTTGGTTTCTCAACTTTCTCAAGAGATTGCATCCGGAGTTTTTATGGACCAAAATCAAGTGCGTGTAATGGGAGCCAATGTTGCCAACGAAGAGCCTGACAAGACCGTCATTTTTATTAATGTGGTTCCATATGGAATCCAGTTTGACAGTTTCACAGCATTTTGGATATATGAAATGTTCTGGAACAAAAAAATATTCATTAAAGATCCCATTTTCAGGGATTATGATGTGCTATATGTTATCTATCCAGGTCTTCCTCCATCTCCGCCAATGGCTTCTGGAAACTTTGGTTCAAACAGCAATGAGAGAACATTTATCCCTCTTGCAGTGGATGTGAGAGAAACTAAGGAAAAAAACCATCAGGATTTGAAGATTCTTGTCATTTTATCATCAGCTACTGCTCTTGTTCTTTTTGTTGGAGCTGCACTCTTTCTGTTGCTAAAATGCAGTTATCAAAATGCCACTGCATCTGTTCTACGGAGTTCATTGAGCTCATATGGAAGTGGATCGACACTACCTAAAATGAAATCATTTTCGGATTCTTCAACACTCAACTCCAGCATTATACCTTATGTAGGATTAGCCAAAACATTTTCTATAGCAGAGATAGAAAAAGCTACTAACAAATTTGCTGCTTCAAGTGTCATTGGTGAAGGCGGGTTTGGCCGTGTCTATGAAGCAACCCTGGTAGATGGTACATCGGCTGCAGTAAAAGTTCTGAAAAGGTATGACCATCATGGAAACCGAGAATTCCTTGCAGAGATTGAGATGCTTAGCCGCTTGCATCATCGGAATTTGGTTAAGTTGATTGGCATATGCGCTGAAGATTACATTCAGTGCCTTGTTTATGAACTAGTTCCAAATGGCAGTGTTGAATTTCATTTGCATGGCGATCCGAGGAACTCTAACCCGTTGGATTGGAATTCTAGGATGAAGATTGCTTTGGGTGCGGCACGGTGTCTGGCTTACCTGCATGAAGATTCAAACCCTTGTGTCATTCACAGGGATTTCAAATCCAGCAATGTCCTGTTGGAACATGATTTTACCCCCCGAGTTTCTGATTTAGGGTTGGCTAGAACTGCTTTGAATGGAGGCAATGAGCACATCTCAACTAATGTTGTTGGAACCTTTGGTTATGTGGCGCCTGAATATGCGATGACGGGTCACCTCCTTGTTAAAAGCGACGTTTATAGTTACGGAGTTGTTCTCCTGGAGCTCCTCACCGGAAGGAAGCCGGTTGATGTGATGAGACCTTCCGGGCAGGAAAATTTGGTCACCTGGGCCAGGCCGCATCTCACGAGCAAAGAAGGCCTTCTGACTATACTAGACCCATCATGCTTGGGTGCCAATGTTCCATTCAACAGCATAACGAAAGTAGCAGCAATTGCTGCGATGTGCGTTGAGGCCGAATTCTCTCAGCGCCCGCCTATGGGCGAGGTTGTTCAAGCCCTCAAATTGGTCTACCATGAGTGTGATGATCATGCGAGACTTAGTTTTCAGAAAGAAGTGCCTGTCCAACATTCAGCAGCTGAGGAATTGTAGGGCAGGCTGGAAGCGCAGATTCTGCTGGGAGTGTCAGCATGCGATTTTGATTCAGTATATGGCAGAGGAATGAATGTGCTTTGCTGGGAAAGTGTTAGATGGAGAAGATGGCTCATTTTAAAGGTGTATTTATTTCTGTTGAGATGTGAGATTTCAATGCAAATTGGCACAGGAAGGAGTTCTTTTATGTTCTTTATATTTTGGTCATGTAAGGTTTATGAGCTGCTTTCTCTTCTAGTTTCTAAGAGGGCAATTTGTTCTTGAACACTAGAACCCTTGTAAATAATAGTTTTAATAAAAGCTGAATTTTGTTACCATATTCCTGAATATTCTCAATAAATGCCCTAATGCTTTTTTC

Network for GWHGAAEX000323

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.16	Pkinase_Tyr	408	679	1.10E-43

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_Extensin

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.800
SRP064423	SRR2545915	Juvenile tuber	9.150
SRP108465	SRR5643513	five period of Gastrodia elata	6.690
	SRR5643514	five period of Gastrodia elata	10.100
	SRR5643515	five period of Gastrodia elata	7.390
	SRR5643524	five period of Gastrodia elata	9.160
	SRR5643525	five period of Gastrodia elata	5.830
	SRR5643528	five period of Gastrodia elata	4.590
	SRR5643658	five period of Gastrodia elata	6.420
	SRR5643659	five period of Gastrodia elata	11.280
	SRR5643660	five period of Gastrodia elata	10.060
	SRR5643661	five period of Gastrodia elata	12.430
	SRR5643662	five period of Gastrodia elata	7.840
	SRR5643663	five period of Gastrodia elata	10.370
	SRR5643664	five period of Gastrodia elata	9.340
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.120
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.720
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.880
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.140
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.480
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	5.840
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.040
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	9.730
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.300
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.940
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.940
SRP279888	Gastro	Gastrodia elata tuber	9.69
	Juven	Juvenile tuber	8.05
	Mother_Gastro	Mother tuber of Gastrodia elata	3.58
	Mother_Juven	Mother tuber of Juvenile	4.21